RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 CTHP32929 405 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 CD70P32970 193 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
LIMS1-204ENST00000409441 MAPKAPK2P49137 400 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 DGKGP49619 791 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 GALK1P51570 392 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 ARL4CP56559 192 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 CBLBQ13191 982 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 RASA2Q15283 850 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 NAIF1Q69YI7 327 aaPredicted RBP13.68□□□□□ -0.22
LIMS1-204ENST00000409441 CXorf57Q6NSI4 855 aaKnown RBP13.68□□□□□ -0.22
LIMS1-204ENST00000409441 UMODL1-AS1Q8N2C9 162 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
LIMS1-204ENST00000409441 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 OR52K2Q8NGK3 314 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 P3H4Q92791 437 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
LIMS1-204ENST00000409441 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 RABEP2Q9H5N1 569 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 PRDM16Q9HAZ2 1276 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 ABCB8Q9NUT2 735 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 EURLQ9NYK6 297 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 WNT16Q9UBV4 365 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 FETUBQ9UGM5 382 aa13.68□□□□□ -0.22
LIMS1-204ENST00000409441 MYOFQ9NZM1 2061 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 APOL1O14791 398 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 RHOCP08134 193 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 EIF2DP41214 584 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 OXCT1P55809 520 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 CORO7P57737 925 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 LMAN2Q12907 356 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 PAFAH1B3Q15102 231 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 HIF1AQ16665 826 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 RNF219Q5W0B1 726 aaPredicted RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 NCBP2-AS2Q69YL0 99 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 SLC9A4Q6AI14 798 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 TXNDC11Q6PKC3 985 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 LZTR1Q8N653 840 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 NPWQ8N729 165 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 PLD5Q8N7P1 536 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 CHMP6Q96FZ7 201 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 LMLNQ96KR4 655 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 P2RY13Q9BPV8 354 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 FEM1AQ9BSK4 669 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 NOL6Q9H6R4 1146 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 FBRSL1Q9HCM7 1045 aaKnown RBP13.67□□□□□ -0.22
LIMS1-204ENST00000409441 SLC27A6Q9Y2P4 619 aa13.67□□□□□ -0.22
LIMS1-204ENST00000409441 KIF26AQ9ULI4 1882 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 E7ESA3 106 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 RAMP2O60895 175 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 MZF1P28698 734 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 PHBP35232 272 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 CSKP41240 450 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 NDST2P52849 883 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 GDF10P55107 478 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 GNA12Q03113 381 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 MESP2Q0VG99 397 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 GRAMD4Q6IC98 578 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 C1orf228Q6PIY5 440 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 PPP1R21Q6ZMI0 780 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 ZNF783Q6ZMS7 281 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 NETO2Q8NC67 525 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 CPT1BQ92523 772 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 SPON2Q9BUD6 331 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 SLC39A8Q9C0K1 460 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 MUC3BQ9H195 1237 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 MAGEH1Q9H213 219 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-204ENST00000409441 SLC24A2Q9UI40 661 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 OR51B4Q9Y5P0 310 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 FAM169AQ9Y6X4 670 aa13.66□□□□□ -0.22
LIMS1-204ENST00000409441 A0A0A0MRY4 1105 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 BCLAF3A2AJT9 711 aaKnown RBP13.65□□□□□ -0.22
LIMS1-204ENST00000409441 TBC1D3BA6NDS4 549 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 RASA4BC9J798 803 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 MYO1CO00159 1063 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 RASA4O43374 803 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 KAT7O95251 611 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 PABPC1P11940 636 aaKnown RBP13.65□□□□□ -0.22
LIMS1-204ENST00000409441 DRD4P21917 467 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 SERPINB6P35237 376 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 GRIA2P42262 883 aa13.65□□□□□ -0.22
LIMS1-204ENST00000409441 NUMBP49757 651 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms