RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TSEN2Q8NCE0 465 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PIP4K2CQ8TBX8 421 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 GRIN3AQ8TCU5 1115 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 OR8D1Q8WZ84 308 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 ARRDC3Q96B67 414 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CALR3Q96L12 384 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 FBRSQ9HAH7 460 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 SP110Q9HB58 689 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 SMG5Q9UPR3 1016 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 WDR87Q6ZQQ6 2873 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 ZBTB24O43167 697 aaPredicted RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 LEFTY1O75610 366 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.16
MBD1-207ENST00000398488 PYGMP11217 842 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 PECAM1P16284 738 aaPredicted RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 GARSP41250 739 aaKnown RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 ZNF211Q13398 564 aaPredicted RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 TXLNBQ8N3L3 684 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 TOE1Q96GM8 510 aaKnown RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 TSGA10Q9BZW7 698 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 FBXL12Q9NXK8 326 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 EVLQ9UI08 416 aaPredicted RBP16.03■□□□□ 0.16
MBD1-207ENST00000398488 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 HEY1Q9Y5J3 304 aa16.03■□□□□ 0.16
MBD1-207ENST00000398488 ZFHX2Q9C0A1 2572 aaPredicted RBP16.02■□□□□ 0.16
MBD1-207ENST00000398488 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 APOL1O14791 398 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 KRT86O43790 486 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 CST8O60676 142 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ZNF217O75362 1048 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 GSRP00390 522 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 DNTTP04053 509 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ACADMP11310 421 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 CD6P30203 668 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 SERPINB6P35237 376 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 PTGER3P43115 390 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 GEMIN4P57678 1058 aaKnown RBP16.02■□□□□ 0.15
MBD1-207ENST00000398488 RHOAP61586 193 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.15
MBD1-207ENST00000398488 MYLK3Q32MK0 819 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 PMS2CLQ68D20 193 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 SLC41A1Q8IVJ1 513 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ATPAF2Q8N5M1 289 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 OR2AP1Q8NGE2 309 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ANP32BQ92688 251 aaKnown RBP16.02■□□□□ 0.15
MBD1-207ENST00000398488 HES6Q96HZ4 224 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.15
MBD1-207ENST00000398488 LGMNQ99538 433 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 IL36AQ9UHA7 158 aa16.02■□□□□ 0.15
MBD1-207ENST00000398488 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 ALOX15BO15296 676 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 RNASEH1O60930 286 aaKnown RBP16.01■□□□□ 0.15
MBD1-207ENST00000398488 ZBTB16Q05516 673 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 CNTN1Q12860 1018 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 IHHQ14623 411 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 LBRQ14739 615 aaKnown RBP16.01■□□□□ 0.15
MBD1-207ENST00000398488 TFDP3Q5H9I0 405 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 CCDC50Q8IVM0 306 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 PLPP6Q8IY26 295 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
MBD1-207ENST00000398488 DCLK2Q8N568 766 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
MBD1-207ENST00000398488 HAUS1Q96CS2 278 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 OLFM3Q96PB7 478 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 HEPHQ9BQS7 1158 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 GPR174Q9BXC1 333 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 MAK16Q9BXY0 300 aaKnown RBP16.01■□□□□ 0.15
MBD1-207ENST00000398488 ZDHHC6Q9H6R6 413 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 THADAQ6YHU6 1953 aa16.01■□□□□ 0.15
MBD1-207ENST00000398488 USP27XA6NNY8 438 aa16■□□□□ 0.15
MBD1-207ENST00000398488 KRIT1O00522 736 aa16■□□□□ 0.15
MBD1-207ENST00000398488 RNASEH2AO75792 299 aaKnown RBP16■□□□□ 0.15
MBD1-207ENST00000398488 ADH1BP00325 375 aa16■□□□□ 0.15
MBD1-207ENST00000398488 LMNAP02545 664 aaKnown RBP16■□□□□ 0.15
MBD1-207ENST00000398488 C5AR1P21730 350 aa16■□□□□ 0.15
MBD1-207ENST00000398488 RWDD2BP57060 319 aa16■□□□□ 0.15
MBD1-207ENST00000398488 TAS2R38P59533 333 aa16■□□□□ 0.15
MBD1-207ENST00000398488 RPL6Q02878 288 aaKnown RBP16■□□□□ 0.15
MBD1-207ENST00000398488 ODF2Q5BJF6 829 aa16■□□□□ 0.15
MBD1-207ENST00000398488 TMCO4Q5TGY1 634 aa16■□□□□ 0.15
MBD1-207ENST00000398488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
MBD1-207ENST00000398488 SYCE1Q8N0S2 351 aa16■□□□□ 0.15
MBD1-207ENST00000398488 TMIEQ8NEW7 156 aa16■□□□□ 0.15
MBD1-207ENST00000398488 TRAF3IP1Q8TDR0 691 aaPredicted RBP16■□□□□ 0.15
MBD1-207ENST00000398488 GANCQ8TET4 914 aa16■□□□□ 0.15
MBD1-207ENST00000398488 MAML1Q92585 1016 aa16■□□□□ 0.15
MBD1-207ENST00000398488 FAM131CQ96AQ9 280 aa16■□□□□ 0.15
MBD1-207ENST00000398488 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
MBD1-207ENST00000398488 SPACA7Q96KW9 195 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms