RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 VIPR2P41587 438 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ZNF135P52742 658 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 PPIDQ08752 370 aaKnown RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 PARP6Q2NL67 630 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 CCDC121Q6ZUS5 278 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 HTR3DQ70Z44 454 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 BBS7Q8IWZ6 715 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ANKS4BQ8N8V4 417 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 BANPQ8N9N5 519 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 IGSF8Q969P0 613 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 RSPRY1Q96DX4 576 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 LRRC3BQ96PB8 259 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 SMYD2Q9NRG4 433 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 IGSF9Q9P2J2 1179 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ZMYM5Q9UJ78 669 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 MAD1L1Q9Y6D9 718 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 VCANP13611 3396 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 KCNK1O00180 336 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 FAM155BO75949 473 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 TACR2P21452 398 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 MAGEA9P43362 315 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 SARNPP82979 210 aaKnown RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 NRG1Q02297 640 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ZKSCAN8Q15776 578 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 CGB2Q6NT52 195 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 SLC26A11Q86WA9 606 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 LRRC6Q86X45 466 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 CFAP52Q8N1V2 620 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 PPM1NQ8N819 430 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 GSDMBQ8TAX9 411 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 CCT6BQ92526 530 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 SERAC1Q96JX3 654 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 RIPOR3Q96MK2 946 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 ASB16Q96NS5 453 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 KLF6Q99612 283 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-203ENST00000369747 GOLGA8RI6L899 631 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 NCAM2O15394 837 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 CNTN5O94779 1100 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 ZWINTO95229 277 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 KCNA5P22460 613 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 PTPN3P26045 913 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 GBP2P32456 591 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 LIG3P49916 1009 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 SGSHP51688 502 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 SKIV2LQ15477 1246 aaKnown RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 SPRED3Q2MJR0 410 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 LRRC8BQ6P9F7 803 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 TRMT10BQ6PF06 316 aaKnown RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 SH2D5Q6ZV89 423 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 CIR1Q86X95 450 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 CTAGE3PQ8IX95 158 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 LGI2Q8N0V4 545 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 ALKBH8Q96BT7 664 aaKnown RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 RPRD1AQ96P16 312 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 MYADMQ96S97 322 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 GDE1Q9NZC3 331 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 ZNF180Q9UJW8 692 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 STOML2Q9UJZ1 356 aa17.61■□□□□ 0.41
UBE3D-203ENST00000369747 LSM7Q9UK45 103 aaKnown RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 NUP210Q8TEM1 1887 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-203ENST00000369747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 TSPAN3O60637 253 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 MT-ND3P03897 115 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 GALNT2Q10471 571 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 ZNF77Q15935 545 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 PDK4Q16654 411 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 ALFQ53S48 1182 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 STEAP4Q687X5 459 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 LVRNQ6Q4G3 990 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 RGS9BPQ6ZS82 235 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 SMARCD2Q92925 531 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 HDAC11Q96DB2 347 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 PRICKLE1Q96MT3 831 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 GORASP1Q9BQQ3 440 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 NDFIP2Q9NV92 336 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 CDH7Q9ULB5 785 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 DOCK4Q8N1I0 1966 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 IGLV3-10A0A075B6K4 115 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 FAM159BA6NKW6 160 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 CCT8L1PA6NM43 557 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 F5H5T6 163 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 UGT1A9O60656 530 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 ZNF189O75820 626 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 HOXC13P31276 330 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 RPS24P62847 133 aaKnown RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 MTA1Q13330 715 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 TTC39BQ5VTQ0 682 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-203ENST00000369747 HHATQ5VTY9 493 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 PID1Q7Z2X4 250 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 TFAP2DQ7Z6R9 452 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 TCP10LQ8TDR4 215 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
UBE3D-203ENST00000369747 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms