RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PPP1R16AQ96I34 528 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 IL22Q9GZX6 179 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 DNAJC18Q9H819 358 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 SPAG4Q9NPE6 437 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 HAT1O14929 419 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 KPNA5O15131 536 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 CATP04040 527 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 RPL4P36578 427 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 IRF8Q02556 426 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ST3GAL1Q11201 340 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PGM5Q15124 567 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ZIK1Q3SY52 487 aaPredicted RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 STXBP5Q5T5C0 1151 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 DENND5AQ6IQ26 1287 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PACS1Q6VY07 963 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ETNPPLQ8TBG4 499 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 SLC2A14Q8TDB8 520 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 MBOAT7Q96N66 472 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 RAB21Q9UL25 225 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 VPS4AQ9UN37 437 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 FAM50BQ9Y247 325 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 SNAP91O60641 907 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 CSDE1O75534 798 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 IFNA16P05015 189 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 UGT2B15P54855 530 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ATG14Q6ZNE5 492 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 MLPHQ9BV36 600 aaPredicted RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 PLGRKTQ9HBL7 147 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 C3orf18Q9UK00 162 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 C2CD2Q9Y426 696 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 POLR1AO95602 1720 aaPredicted RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 SLC28A1O00337 649 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TSPAN9O75954 239 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PRKAR1AP10644 381 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 AXLP30530 894 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TCEA2Q15560 299 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 OLFML1Q6UWY5 402 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PSTKQ8IV42 348 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 ELMO1Q92556 727 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 OXCT2Q9BYC2 517 aaPredicted RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 RNPEPL1Q9HAU8 725 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.04■□□□□ -0
LMX1B-201ENST00000355497 TET3O43151 1660 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 UBE2Q2LH0YL09 131 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TRIM38O00635 465 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 MLYCDO95822 493 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ARHGDIBP52566 201 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TTC7BQ86TV6 843 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 SIX5Q8N196 739 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ATL1Q8WXF7 558 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 COL26A1Q96A83 441 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ZHX1-C8orf76Q96EF9 292 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 ASB7Q9H672 318 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PRDM8Q9NQV8 689 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 IL12AP29459 219 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 MYBPC1Q00872 1141 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PERM1Q5SV97 790 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PGLYRP2Q96PD5 576 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 ELL3Q9HB65 397 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 LACTBL1A8MY62 500 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 FGF10O15520 208 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 TMCC2O75069 709 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 NTRK1P04629 796 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PPATQ06203 517 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 SLC39A12Q504Y0 691 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 FAM171BQ6P995 826 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 ETAA1Q9NY74 926 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 AKAP7Q9P0M2 348 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 KPNA3O00505 521 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 RPL3P39023 403 aaKnown RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 PSME3P61289 254 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 SLC25A3Q00325 362 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 INSCQ1MX18 579 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 NEPROQ6NW34 567 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 DSELQ8IZU8 1212 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PTGR2Q8N8N7 351 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 DNAJB3Q8WWF6 145 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 TBC1D30Q9Y2I9 924 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PCDHGA3Q9Y5H0 932 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 IQCMA0A1B0GVH7 501 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 CHRNGP07510 517 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 USP17L7P0C7H9 530 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 NR1H2P55055 460 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 LSM3P62310 102 aaKnown RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 BNIP2Q12982 314 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 FBXL19Q6PCT2 694 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 BHLHB9Q6PI77 547 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 ARHGAP36Q6ZRI8 547 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 MTG1Q9BT17 334 aaPredicted RBP15.03■□□□□ -0
LMX1B-201ENST00000355497 CAB39LQ9H9S4 337 aa15.03■□□□□ -0
LMX1B-201ENST00000355497 FAM237BA0A1B0GVD1 139 aa15.02■□□□□ -0
LMX1B-201ENST00000355497 H3BRB1 525 aa15.02■□□□□ -0
LMX1B-201ENST00000355497 ADCY6O43306 1168 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms