RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 LIX1Q8N485 282 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 PMM1Q92871 262 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 REEP2Q9BRK0 252 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 PTGFRNQ9P2B2 879 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GULP1Q9UBP9 304 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 A0A087WWV3 80 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SERPINB7O75635 380 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GPALPP1Q8IXQ4 340 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 UBR7Q8N806 425 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 THRSPQ92748 146 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 TBX3O15119 743 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ACAT1P24752 427 aaKnown RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 CDC42P60953 191 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SLC25A25Q6KCM7 469 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DET1Q7L5Y6 550 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DGLUCYQ7Z3D6 616 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DENND6BQ8NEG7 585 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ZNF286BP0CG31 522 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 NUMBP49757 651 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ACSM2BQ68CK6 577 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ARMCX1Q9P291 453 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 NEDD4P46934 1319 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 NOL4O94818 638 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ARID3BQ8IVW6 561 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ZC3H7AQ8IWR0 971 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 SCUBE1Q8IWY4 988 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 METTL6Q8TCB7 284 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 GPN1Q9HCN4 374 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 RBM22Q9NW64 420 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 CAPN14A8MX76 684 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 RECQL5O94762 991 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 VDRP11473 427 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 UGT2B15P54855 530 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 IL27RAQ6UWB1 636 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ERGIC3Q9Y282 383 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PGRMC2O15173 223 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ADH1AP07327 375 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 GMPSP49915 693 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 LOC100506127A0A0U1RQW1 187 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 KLHL41O60662 606 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PPP3R1P63098 170 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 TMEM120BA0PK00 339 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 CAPGP40121 348 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 TSEN15Q8WW01 171 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PHF21BQ96EK2 531 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 SMPD4Q9NXE4 827 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 TOR4AQ9NXH8 423 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 CRNNQ9UBG3 495 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 MRPS7Q9Y2R9 242 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 GDI2P50395 445 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ITFG1Q8TB96 612 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
UBE3A-226ENST00000637886 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
UBE3A-226ENST00000637886 ISM1B1AKI9 464 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.31
UBE3A-226ENST00000637886 PRKAR1AP10644 381 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 KCNJ5P48544 419 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 ALG10Q5BKT4 473 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 ADAM7Q9H2U9 754 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 CDH9Q9ULB4 789 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 GRIN2DO15399 1336 aa13.08□□□□□ -0.31
UBE3A-226ENST00000637886 A0A087X1B8 175 aa13.08□□□□□ -0.32
UBE3A-226ENST00000637886 TSPAN1O60635 241 aa13.08□□□□□ -0.32
UBE3A-226ENST00000637886 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
UBE3A-226ENST00000637886 CERCAMQ5T4B2 595 aa13.08□□□□□ -0.32
UBE3A-226ENST00000637886 AGBL2Q5U5Z8 902 aa13.08□□□□□ -0.32
UBE3A-226ENST00000637886 PRR23BQ6ZRT6 265 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms