RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CMTM5Q96DZ9 223 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CLPTM1LQ96KA5 538 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 TMEM209Q96SK2 561 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 OXCT2Q9BYC2 517 aaPredicted RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 COG4Q9H9E3 785 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 UBP1Q9NZI7 540 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 ARHGEF37A1IGU5 675 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 WASH4PA8MWX3 477 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ADAMTS4O75173 837 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 F7P08709 466 aaPredicted RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 GLDCP23378 1020 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 SLC5A3P53794 718 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ITGA7Q13683 1181 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 LPIN1Q14693 890 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 UGP2Q16851 508 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 MUM1Q2TAK8 710 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 VWA5B1Q5TIE3 1220 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 RWDD4Q6NW29 188 aaKnown RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 SCD5Q86SK9 330 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ADGRG6Q86SQ4 1221 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 SPATA22Q8NHS9 363 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 STYXQ8WUJ0 223 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 RNF34Q969K3 372 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CNDP1Q96KN2 507 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ACE2Q9BYF1 805 aaPredicted RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 DRC3Q9H069 523 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 TREX1Q9NSU2 369 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 OSER1Q9NX31 292 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CORO1CQ9ULV4 474 aaPredicted RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 E2F8A0AVK6 867 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 A6NHS1 94 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 DFFAO00273 331 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 MATN2O00339 956 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 CABYRO75952 493 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 PGK1P00558 417 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 AHSGP02765 367 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 SKIP12755 728 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 ABCG1P45844 678 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 ZNF157P51786 506 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 GPR162Q16538 588 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 PAN2Q504Q3 1202 aaKnown RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 FAM26DQ5JW98 314 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 C6orf163Q5TEZ5 329 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 LIPMQ5VYY2 423 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 TIGD7Q6NT04 549 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 CENPLQ8N0S6 344 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 THEM5Q8N1Q8 247 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 SCG3Q8WXD2 468 aaKnown RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 CASP10Q92851 521 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 FCRL2Q96LA5 508 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 C1orf74Q96LT6 269 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 GATA5Q9BWX5 397 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 SLC39A8Q9C0K1 460 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 ENTPD7Q9NQZ7 604 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 ANGPTL2Q9UKU9 493 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 SLC39A10Q9ULF5 831 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 LRCH1Q9Y2L9 728 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 TCAF1Q9Y4C2 921 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 MEI4A8MW99 385 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 HSPA4LO95757 839 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 MT-CYBP00156 380 aaPredicted RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 ITGB1P05556 798 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 THPOP40225 353 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 PGFP49763 221 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 GEMP55040 296 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 INHBEP58166 350 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 TSPY1Q01534 308 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 SLC12A1Q13621 1099 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 FSCBQ5H9T9 825 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 AAGABQ6PD74 315 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 RANBP10Q6VN20 620 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 MFSD6LQ8IWD5 586 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 RTL3Q8N8U3 475 aaKnown RBP9.57□□□□□ -0.88
PDPN-212ENST00000621990 TRIB2Q92519 343 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 GPR78Q96P69 363 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 RAP2CQ9Y3L5 183 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 DOCK4Q8N1I0 1966 aa9.57□□□□□ -0.88
PDPN-212ENST00000621990 SLC22A2O15244 555 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SEPT4O43236 478 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ZBTB14O43829 449 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 FKBP6O75344 327 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 PEX11BO96011 259 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 HLA-DQB2P05538 268 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ANPEPP15144 967 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SESN3P58005 492 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 AP2B1P63010 937 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 MRPS35P82673 323 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 SLC25A3Q00325 362 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 USP4Q13107 963 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SLC9B1Q4ZJI4 515 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 C1orf146Q5VVC0 180 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 BTBD8Q5XKL5 378 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 CCSAPQ6IQ19 270 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 MSANTD2Q6P1R3 559 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 LMNTD2Q8IXW0 634 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms