RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 MAGOHBQ96A72 148 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 EXOC2Q96KP1 924 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 MRGPRX3Q96LB0 322 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 TSGA13Q96PP4 275 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 ACOX2Q99424 681 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 CINPQ9BW66 212 aaPredicted RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 OSBPL6Q9BZF3 934 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 TNKS2Q9H2K2 1166 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 HOMER3Q9NSC5 361 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 RNF14Q9UBS8 474 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 HS3ST2Q9Y278 367 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 TTC34A8MYJ7 566 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 WASH3PC4AMC7 463 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 SGK1O00141 431 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 MATN3O15232 486 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 SMAD6O43541 496 aaKnown RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 PHF2O75151 1096 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 STK10O94804 968 aaKnown RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 KLF8O95600 359 aaPredicted RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 CD160O95971 181 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 PEX11BO96011 259 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 JCHAINP01591 159 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 HLA-EP13747 358 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 CCNB1P14635 433 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 PRKCHP24723 683 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 IL12RB1P42701 662 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 MMP13P45452 471 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 KCNJ1P48048 391 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 NRLP54845 237 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 RHOAP61586 193 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 ZNF33AQ06730 810 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 C2orf54Q08AI8 447 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 ZBTB17Q13105 803 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 CYTH1Q15438 398 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 DLG2Q15700 870 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 FBXO43Q4G163 708 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 DGKKQ5KSL6 1271 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 MARC1Q5VT66 337 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 TTC27Q6P3X3 843 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 BBS5Q8N3I7 341 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 ALLCQ8N6M5 410 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 RPLP0P6Q8NHW5 317 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 CLDN23Q96B33 292 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 ZNF599Q96NL3 588 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 AGAP3Q96P47 875 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 FERMT1Q9BQL6 677 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 TM6SF2Q9BZW4 377 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 NT5MQ9NPB1 228 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 C11orf16Q9NQ32 467 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 RBM22Q9NW64 420 aaKnown RBP eCLIP12.35□□□□□ -0.43
IFT20-207ENST00000578547 THAP10Q9P2Z0 257 aaPredicted RBP12.35□□□□□ -0.43
IFT20-207ENST00000578547 SEPT3Q9UH03 358 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 SLC8A2Q9UPR5 921 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 STARD13Q9Y3M8 1113 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
IFT20-207ENST00000578547 BCLAF3A2AJT9 711 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 F5H423 210 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 MTSS1O43312 755 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 IFNB1P01574 187 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 HLA-DQB2P05538 268 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 EPHX1P07099 455 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 DCNP07585 359 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
IFT20-207ENST00000578547 AOC1P19801 751 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 PTPN3P26045 913 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 RENBPP51606 427 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 GDF10P55107 478 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 IFI35P80217 286 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 MRPS21P82921 87 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 SLC20A2Q08357 652 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 ITKQ08881 620 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 GAS6Q14393 721 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 RFTN1Q14699 578 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 E2F5Q15329 346 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 ATXN7L2Q5T6C5 722 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 SDE2Q6IQ49 451 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 PKN3Q6P5Z2 889 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 CCDC137Q6PK04 289 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 Q6ZVU0 165 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms