RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ARFGAP1Q8N6T3 406 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 GRIN3AQ8TCU5 1115 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 GTPBP2Q9BX10 602 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 TNKS2Q9H2K2 1166 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 DONSONQ9NYP3 566 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 SARDHQ9UL12 918 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 WASH4PA8MWX3 477 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 ARHGAP33O14559 1287 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 CYP1A2P05177 515 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 IGHV4-34P06331 123 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 CD27P26842 260 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 CHRNA3P32297 505 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 PCK1P35558 622 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 AFF3P51826 1226 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 TSR1Q2NL82 804 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 POM121L1PQ3SYA9 428 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 PARP15Q460N3 678 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 CCDC122Q5T0U0 273 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 CYP4V2Q6ZWL3 525 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 ZNF354CQ86Y25 554 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 OR14C36Q8NHC7 312 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 FAM131CQ96AQ9 280 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 NUP85Q9BW27 656 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 ZDHHC5Q9C0B5 715 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 DEF6Q9H4E7 631 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 NOL6Q9H6R4 1146 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 ABHD10Q9NUJ1 306 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 ANAPC7Q9UJX3 599 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 TPX2Q9ULW0 747 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 NENFQ9UMX5 172 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 KNL1Q8NG31 2342 aa17.58■□□□□ 0.4
CHMP1A-208ENST00000550102 DOCK9Q9BZ29 2069 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 ANKRD36A6QL64 1941 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 EEF2KO00418 725 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 KPNA3O00505 521 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 CTSLP07711 333 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 ZNF135P52742 658 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 CNTN1Q12860 1018 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 GRIK2Q13002 908 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 PIGHQ14442 188 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 TEAD4Q15561 434 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 SLC18A3Q16572 532 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 CA9Q16790 459 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 UAP1L1Q3KQV9 507 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 PPP6R3Q5H9R7 873 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 PPM1JQ5JR12 505 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 AGBL4Q5VU57 503 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 SARM1Q6SZW1 724 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 DPY19L3Q6ZPD9 716 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 UMODL1-AS1Q8N2C9 162 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 MINDY1Q8N5J2 469 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 NIPA2Q8N8Q9 360 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 TMIEQ8NEW7 156 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 C1orf216Q8TAB5 229 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 ISG20Q96AZ6 181 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 KCTD15Q96SI1 283 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 KDM4CQ9H3R0 1056 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 OSGEPQ9NPF4 335 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 DYRK4Q9NR20 520 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 IL36AQ9UHA7 158 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 IP6K2Q9UHH9 426 aa17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 FCF1Q9Y324 198 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-208ENST00000550102 SSU72P8A0A1W2PR75 194 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 RASA4BC9J798 803 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 PLK4O00444 970 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 TM4SF5O14894 197 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 RASA4O43374 803 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 PLRG1O43660 514 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 KDELR3O43731 214 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 ZNF821O75541 412 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 KCNA4P22459 653 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 DNA2P51530 1060 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 CCR5P51681 352 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 CCNHP51946 323 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 RFX8Q6ZV50 586 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 CNGA4Q8IV77 575 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 CHST14Q8NCH0 376 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 CTNNBL1Q8WYA6 563 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 ARHGEF26Q96DR7 871 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 HMCESQ96FZ2 354 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 PPP1R16AQ96I34 528 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 TM6SF2Q9BZW4 377 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 TM9SF3Q9HD45 589 aa17.56■□□□□ 0.4
CHMP1A-208ENST00000550102 SHROOM3Q8TF72 1996 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 DAPK3O43293 454 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 BUB1O43683 1085 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 OPHN1O60890 802 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 CD160O95971 181 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 GRIA4P48058 902 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 CCDC15Q0P6D6 951 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 SERINC3Q13530 473 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 CARD16Q5EG05 197 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 ZNF564Q8TBZ8 553 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 HEPHQ9BQS7 1158 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms