RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CHRNA3P32297 505 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 ACVRL1P37023 503 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 ADPRHP54922 357 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 PIGHQ14442 188 aaPredicted RBP16.22■□□□□ 0.19
DDX54-204ENST00000546898 PARP15Q460N3 678 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 CCDC122Q5T0U0 273 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 UMODL1-AS1Q8N2C9 162 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 TMIEQ8NEW7 156 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 C1orf216Q8TAB5 229 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 ISG20Q96AZ6 181 aaKnown RBP16.22■□□□□ 0.19
DDX54-204ENST00000546898 PEBP4Q96S96 227 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 THAP2Q9H0W7 228 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 DHX35Q9H5Z1 703 aaKnown RBP16.22■□□□□ 0.19
DDX54-204ENST00000546898 ZNHIT6Q9NWK9 470 aaKnown RBP16.22■□□□□ 0.19
DDX54-204ENST00000546898 PCSK1NQ9UHG2 260 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 SARDHQ9UL12 918 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 TMEM131Q92545 1883 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 EEF2KO00418 725 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 KDELR3O43731 214 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 MFAP3LO75121 409 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 CYP1A2P05177 515 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 IGHV4-34P06331 123 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 CTSLP07711 333 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 EIF4A3P38919 411 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 MAPK8P45983 427 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 CCR5P51681 352 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 AFF3P51826 1226 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 CCDC15Q0P6D6 951 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 SLC18A3Q16572 532 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 SARM1Q6SZW1 724 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 CYP4V2Q6ZWL3 525 aaPredicted RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 NIPA2Q8N8Q9 360 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 OR14C36Q8NHC7 312 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 CASKIN2Q8WXE0 1202 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 NOL6Q9H6R4 1146 aaKnown RBP16.21■□□□□ 0.19
DDX54-204ENST00000546898 ABHD10Q9NUJ1 306 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 GPATCH2LQ9NWQ4 482 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 IL36AQ9UHA7 158 aa16.21■□□□□ 0.19
DDX54-204ENST00000546898 NCOR2Q9Y618 2525 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 FAM47DPA6NHR8 397 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 KPNA3O00505 521 aaPredicted RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 PLRG1O43660 514 aaKnown RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 ZNF821O75541 412 aaPredicted RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 CD160O95971 181 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 GSRP00390 522 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 GRIA4P48058 902 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 CNTN1Q12860 1018 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 GRIK2Q13002 908 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 TEAD4Q15561 434 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 CARD16Q5EG05 197 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 PPM1JQ5JR12 505 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 AGBL4Q5VU57 503 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 IL27RAQ6UWB1 636 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 DPY19L3Q6ZPD9 716 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 ZNF354CQ86Y25 554 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 CNGA4Q8IV77 575 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 MINDY1Q8N5J2 469 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 KCTD15Q96SI1 283 aaPredicted RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 NUP85Q9BW27 656 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 TNKS2Q9H2K2 1166 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 DEF6Q9H4E7 631 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 TM9SF3Q9HD45 589 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 DYRK4Q9NR20 520 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 DNAAF2Q9NVR5 837 aaKnown RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 IP6K2Q9UHH9 426 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 ANAPC7Q9UJX3 599 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 FCF1Q9Y324 198 aaKnown RBP16.2■□□□□ 0.18
DDX54-204ENST00000546898 KNL1Q8NG31 2342 aa16.2■□□□□ 0.18
DDX54-204ENST00000546898 DOCK9Q9BZ29 2069 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 A0A1W2PPC4 97 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 RASA4BC9J798 803 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 RASA4O43374 803 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 OPHN1O60890 802 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 CSRP1P21291 193 aaKnown RBP16.19■□□□□ 0.18
DDX54-204ENST00000546898 NUDT1P36639 197 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 HCAR3P49019 387 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 CCNHP51946 323 aaPredicted RBP16.19■□□□□ 0.18
DDX54-204ENST00000546898 NDST2P52849 883 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 METAP1P53582 386 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 CA9Q16790 459 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 ASTE1Q2TB18 679 aaPredicted RBP16.19■□□□□ 0.18
DDX54-204ENST00000546898 UAP1L1Q3KQV9 507 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 BOLA3Q53S33 107 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 INO80DQ53TQ3 878 aaPredicted RBP16.19■□□□□ 0.18
DDX54-204ENST00000546898 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 CHST14Q8NCH0 376 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 GRIN3AQ8TCU5 1115 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 CTNNBL1Q8WYA6 563 aaPredicted RBP16.19■□□□□ 0.18
DDX54-204ENST00000546898 ARHGEF26Q96DR7 871 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 LRIG1Q96JA1 1093 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 HEPHQ9BQS7 1158 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 ORAI3Q9BRQ5 295 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms