RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 YBEYP58557 167 aaPredicted RBP23.09■■□□□ 1.29
SNIP1-203ENST00000493916 TPI1P60174 286 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 CCDC122Q5T0U0 273 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 SARM1Q6SZW1 724 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 UMODL1-AS1Q8N2C9 162 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 ISG20Q96AZ6 181 aaKnown RBP23.09■■□□□ 1.29
SNIP1-203ENST00000493916 ZDHHC5Q9C0B5 715 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 TNKS2Q9H2K2 1166 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 KDM4CQ9H3R0 1056 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 DHX35Q9H5Z1 703 aaKnown RBP23.09■■□□□ 1.29
SNIP1-203ENST00000493916 DONSONQ9NYP3 566 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 TPX2Q9ULW0 747 aaKnown RBP23.09■■□□□ 1.29
SNIP1-203ENST00000493916 ZSCAN5CA6NGD5 496 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 KDELR3O43731 214 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 PRNPP04156 253 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 EIF4A3P38919 411 aaKnown RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 RECQLP46063 649 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 CCR5P51681 352 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 ZNF135P52742 658 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 ATXN3P54252 364 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 MAPK8IP2Q13387 824 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 PIGHQ14442 188 aaPredicted RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 CA9Q16790 459 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 PARP15Q460N3 678 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 AGBL4Q5VU57 503 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 NIPA2Q8N8Q9 360 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 OR14C36Q8NHC7 312 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 ORAI3Q9BRQ5 295 aa23.08■■□□□ 1.29
SNIP1-203ENST00000493916 GTPBP2Q9BX10 602 aaKnown RBP23.08■■□□□ 1.29
SNIP1-203ENST00000493916 NUMA1Q14980 2115 aa23.08■■□□□ 1.28
SNIP1-203ENST00000493916 SSU72P8A0A1W2PR75 194 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 FAM47DPA6NHR8 397 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 EEF2KO00418 725 aaKnown RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 PLRG1O43660 514 aaKnown RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 MFAP3LO75121 409 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 AFF3P51826 1226 aaKnown RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 CNTN1Q12860 1018 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 GRIK2Q13002 908 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 SLC18A3Q16572 532 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 ASTE1Q2TB18 679 aaPredicted RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 DPY19L3Q6ZPD9 716 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 PLPP6Q8IY26 295 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 CHST14Q8NCH0 376 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 KCTD15Q96SI1 283 aaPredicted RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 NUP85Q9BW27 656 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 ABHD10Q9NUJ1 306 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 ZNHIT6Q9NWK9 470 aaKnown RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 IL36AQ9UHA7 158 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 FCF1Q9Y324 198 aaKnown RBP23.07■■□□□ 1.28
SNIP1-203ENST00000493916 ACTL7AQ9Y615 435 aa23.07■■□□□ 1.28
SNIP1-203ENST00000493916 A0A1W2PPC4 97 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 RASA4BC9J798 803 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 PLK4O00444 970 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 RASA4O43374 803 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 CARD16Q5EG05 197 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 RFX8Q6ZV50 586 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 MINDY1Q8N5J2 469 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 CASKIN2Q8WXE0 1202 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 ARHGEF26Q96DR7 871 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 HMCESQ96FZ2 354 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 TM9SF3Q9HD45 589 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 DNAAF2Q9NVR5 837 aaKnown RBP23.06■■□□□ 1.28
SNIP1-203ENST00000493916 IP6K2Q9UHH9 426 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 ANAPC7Q9UJX3 599 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 SLCO1B1Q9Y6L6 691 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 WASF2Q9Y6W5 498 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 GON4LQ3T8J9 2241 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 PI4KAP42356 2102 aa23.06■■□□□ 1.28
SNIP1-203ENST00000493916 GRIA4P48058 902 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 HCAR3P49019 387 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 CCNHP51946 323 aaPredicted RBP23.05■■□□□ 1.28
SNIP1-203ENST00000493916 NDST2P52849 883 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 SERINC3Q13530 473 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 TSR1Q2NL82 804 aaKnown RBP23.05■■□□□ 1.28
SNIP1-203ENST00000493916 POM121L1PQ3SYA9 428 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 PPM1JQ5JR12 505 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 PIP5KL1Q5T9C9 394 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 GRIN3AQ8TCU5 1115 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 PPP1R16AQ96I34 528 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 LRRC19Q9H756 370 aa23.05■■□□□ 1.28
SNIP1-203ENST00000493916 UPK3BL1B0FP48 263 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 UPK3BL2E5RIL1 263 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 KPNA3O00505 521 aaPredicted RBP23.04■■□□□ 1.28
SNIP1-203ENST00000493916 LATO43561 262 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 OPHN1O60890 802 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 LEFTY1O75610 366 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 GSRP00390 522 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 IL1R2P27930 398 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 CCDC15Q0P6D6 951 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 TEAD4Q15561 434 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 DPYSL2Q16555 572 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 UAP1L1Q3KQV9 507 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 BOLA3Q53S33 107 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 INO80DQ53TQ3 878 aaPredicted RBP23.04■■□□□ 1.28
SNIP1-203ENST00000493916 ARSIQ5FYB1 569 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 IL27RAQ6UWB1 636 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 ZNF354CQ86Y25 554 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 CNGA4Q8IV77 575 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 ARRDC3Q96B67 414 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms