RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HNRNPLP14866 589 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEC13-215ENST00000477547 PRKCHP24723 683 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 NNMTP40261 264 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 IL12RB1P42701 662 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 WASP42768 502 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 PPIDQ08752 370 aaKnown RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 LONRF2Q1L5Z9 754 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 TMCO4Q5TGY1 634 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 TIGD7Q6NT04 549 aaPredicted RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 C22orf39Q6P5X5 142 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 BZW1Q7L1Q6 419 aaKnown RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 LRRC49Q8IUZ0 686 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 SH2D3CQ8N5H7 860 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 ZNF366Q8N895 744 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 IL17RCQ8NAC3 791 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 ATP11CQ8NB49 1132 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 TTC13Q8NBP0 860 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 CCNYQ8ND76 341 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 LRRN4Q8WUT4 740 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 MYO19Q96H55 970 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 CNTNAP3BQ96NU0 1288 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 QKIQ96PU8 341 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEC13-215ENST00000477547 CNTNAP3Q9BZ76 1288 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 CHRDQ9H2X0 955 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 R3HDM2Q9Y2K5 976 aaKnown RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 SIT1Q9Y3P8 196 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 ACTL7AQ9Y615 435 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 SAR1BQ9Y6B6 198 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 STON1Q9Y6Q2 735 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 R4GN57 208 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 NCOR2Q9Y618 2525 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 CXorf51AA0A1B0GTR3 108 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 ZNF185O15231 689 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 TMCC1O94876 653 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 MT-CO1P00395 513 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 LMNAP02545 664 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 DCNP07585 359 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 HLA-EP13747 358 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 NTSR1P30989 418 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 CLCN6P51797 869 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 EIF3EP60228 445 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 AP1B1Q10567 949 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 PRKD1Q15139 912 aaPredicted RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 HSF5Q4G112 596 aaPredicted RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 PKN3Q6P5Z2 889 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 ZC3H18Q86VM9 953 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 CCDC13Q8IYE1 715 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 RASGEF1CQ8N431 466 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 TXNDC5Q8NBS9 432 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 KCNV2Q8TDN2 545 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 NSMCE1Q8WV22 266 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 MAIP1Q8WWC4 291 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 ATG4AQ8WYN0 398 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 ZNF592Q92610 1267 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 CLDN23Q96B33 292 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 MS4A14Q96JA4 679 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 CAPZA3Q96KX2 299 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 LGMNQ99538 433 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 SMARCAL1Q9NZC9 954 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 SLC8A2Q9UPR5 921 aa15.61■□□□□ 0.09
SEC13-215ENST00000477547 FCF1Q9Y324 198 aaKnown RBP15.61■□□□□ 0.09
SEC13-215ENST00000477547 TTC34A8MYJ7 566 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 H7C0C1 242 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 K7ERQ8 282 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 HOXB2P14652 356 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 VAV1P15498 845 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 RPS9P46781 194 aaKnown RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 ATP5OP48047 213 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 FZD5Q13467 585 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 ZNF235Q14590 738 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 ACCSLQ4AC99 568 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 SLC45A4Q5BKX6 768 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 EOGTQ5NDL2 527 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 SDE2Q6IQ49 451 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 METTL3Q86U44 580 aaKnown RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 CDKL3Q8IVW4 592 aaPredicted RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 KDM1BQ8NB78 822 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 TFB1MQ8WVM0 346 aaKnown RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 CASKIN2Q8WXE0 1202 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 ZNF599Q96NL3 588 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 TSGA13Q96PP4 275 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 NAP1L3Q99457 506 aaPredicted RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 CINPQ9BW66 212 aaPredicted RBP15.6■□□□□ 0.09
SEC13-215ENST00000477547 BRD8Q9H0E9 1235 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 TMEM245Q9H330 911 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 SLCO3A1Q9UIG8 710 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 MMP17Q9ULZ9 603 aa15.6■□□□□ 0.09
SEC13-215ENST00000477547 HACD1B0YJ81 288 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 CHURC1-FNTBB4DL54 471 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 SGK1O00141 431 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 SMAD6O43541 496 aaKnown RBP15.59■□□□□ 0.09
SEC13-215ENST00000477547 ATP9BO43861 1147 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 CD160O95971 181 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 TUBB4AP04350 444 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 EPHX1P07099 455 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 RBP3P10745 1247 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 PRLRP16471 622 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 CCNCP24863 283 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 MAGEA9P43362 315 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms