RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FSCBQ5H9T9 825 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 NXPE3Q969Y0 559 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 MYADMQ96S97 322 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 TRIM31Q9BZY9 425 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 NEUROG2Q9H2A3 272 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 POMKQ9H5K3 350 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 EPHX3Q9H6B9 360 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 SP110Q9HB58 689 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 ETNK1Q9HBU6 452 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 VPS45Q9NRW7 570 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 C5orf42Q9H799 3197 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 DOCK6Q96HP0 2047 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 GOLGA6BA6NDN3 693 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 J3KR12 359 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZBTB24O43167 697 aaPredicted RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 JCHAINP01591 159 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 TYRP14679 529 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 PSMC3P17980 439 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 EIF2DP41214 584 aaKnown RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 VIPR2P41587 438 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 MAGEA3P43357 314 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 SARNPP82979 210 aaKnown RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 SULT2A1Q06520 285 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 LBRQ14739 615 aaKnown RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 LY6G5CQ5SRR4 150 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 RNF219Q5W0B1 726 aaPredicted RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 IL31Q6EBC2 164 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 TANGO2Q6ICL3 276 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 RETSATQ6NUM9 610 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 VITQ6UXI7 678 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 PRUNE1Q86TP1 453 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 ETFBKMTQ8IXQ9 262 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 BBS5Q8N3I7 341 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 CARNMT1Q8N4J0 409 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 LRRC39Q96DD0 335 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZNF419Q96HQ0 510 aaPredicted RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 MGME1Q9BQP7 344 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 BBS2Q9BXC9 721 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 SLC25A51Q9H1U9 297 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 GLOD4Q9HC38 313 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 ATP13A1Q9HD20 1204 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 TRPV5Q9NQA5 729 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 RBM22Q9NW64 420 aaKnown RBP eCLIP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 KLHL8Q9P2G9 620 aaPredicted RBP14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 SEPT3Q9UH03 358 aa14.52□□□□□ -0.08
SHMT1P1-201ENST00000419974 DENND4AQ7Z401 1863 aa14.52□□□□□ -0.09
SHMT1P1-201ENST00000419974 KIF26AQ9ULI4 1882 aaPredicted RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 ANXA9O76027 345 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 AP2A1O95782 977 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 CD160O95971 181 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 TSHRP16473 764 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 HLA-FP30511 346 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 MMP13P45452 471 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 CSNK1DP48730 415 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 NRLP54845 237 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARF5P84085 180 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 SLC10A7Q0GE19 358 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 LMAN2Q12907 356 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 PLEKHG6Q3KR16 790 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 TPGS1Q6ZTW0 290 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 B4GALNT4Q76KP1 1039 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 TMC3Q7Z5M5 1100 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 PLPP6Q8IY26 295 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 CCDC33Q8N5R6 958 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 NETO2Q8NC67 525 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 OR7D4Q8NG98 312 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 WFDC5Q8TCV5 224 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 WFIKKN2Q8TEU8 576 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 TTC17Q96AE7 1141 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 ISG20Q96AZ6 181 aaKnown RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 IMP4Q96G21 291 aaKnown RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 MUC3BQ9H195 1237 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 VIPAS39Q9H9C1 493 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 XAB2Q9HCS7 855 aaKnown RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 ABCB8Q9NUT2 735 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 UBA2Q9UBT2 640 aaPredicted RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 HS3ST2Q9Y278 367 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 USP15Q9Y4E8 981 aaPredicted RBP14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 WNT6Q9Y6F9 365 aa14.51□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARNTLO00327 626 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 ALOX15BO15296 676 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 TMEM63AO94886 807 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 EPOP01588 193 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 CYP17A1P05093 508 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 CISD3P0C7P0 127 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 CR2P20023 1033 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 MZF1P28698 734 aaPredicted RBP14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 CSKP41240 450 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 VPS41P49754 854 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 NR1H3Q13133 447 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 LRRC8BQ6P9F7 803 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 TRMT10CQ7L0Y3 403 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms