RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CXCL12P48061 93 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 NUBP1P53384 320 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 TFDP2Q14188 446 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 HNRNPA1L2Q32P51 320 aaKnown RBP22.13■■□□□ 1.13
SNX1-206ENST00000559389 C1orf210Q8IVY1 113 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 ZNF366Q8N895 744 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 FRS2Q8WU20 508 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 HERPUD2Q9BSE4 406 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 TLR10Q9BXR5 811 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 DTLQ9NZJ0 730 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 EFR3BQ9Y2G0 817 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 TTC34A8MYJ7 566 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 K7ERQ8 282 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 K7ESF4 209 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 LAMTOR5O43504 91 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 KIF5CO60282 957 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 CST8O60676 142 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 EPHX1P07099 455 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 DGKEP52429 567 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 DYNLT1P63172 113 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 SLC20A2Q08357 652 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ADCY2Q08462 1091 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ZNF211Q13398 564 aaPredicted RBP22.12■■□□□ 1.13
SNX1-206ENST00000559389 CAMK2GQ13555 558 aaPredicted RBP22.12■■□□□ 1.13
SNX1-206ENST00000559389 LLGL1Q15334 1064 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 RPS6KA1Q15418 735 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 KAZNQ674X7 775 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 KIAA1211LQ6NV74 962 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 AADACL2Q6P093 401 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 C22orf39Q6P5X5 142 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ARHGAP36Q6ZRI8 547 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 BBS12Q6ZW61 710 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 MAML2Q8IZL2 1156 aaPredicted RBP22.12■■□□□ 1.13
SNX1-206ENST00000559389 ATPAF2Q8N5M1 289 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ATP11CQ8NB49 1132 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 OSBPL8Q9BZF1 889 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 SP110Q9HB58 689 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 IPO11Q9UI26 975 aaKnown RBP22.12■■□□□ 1.13
SNX1-206ENST00000559389 SLC8A2Q9UPR5 921 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ACTL7AQ9Y615 435 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 ZDBF2Q9HCK1 2354 aa22.12■■□□□ 1.13
SNX1-206ENST00000559389 J3KR12 359 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 SMAD6O43541 496 aaKnown RBP22.11■■□□□ 1.13
SNX1-206ENST00000559389 MAP3K6O95382 1288 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 TGM2P21980 687 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 CETN2P41208 172 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 GARSP41250 739 aaKnown RBP22.11■■□□□ 1.13
SNX1-206ENST00000559389 IL10RBQ08334 325 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 SLC10A2Q12908 348 aaPredicted RBP22.11■■□□□ 1.13
SNX1-206ENST00000559389 STARD3Q14849 445 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 ZNF569Q5MCW4 686 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 SLC35F6Q8N357 371 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 CASKIN2Q8WXE0 1202 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 OLFM3Q96PB7 478 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 HHIPQ96QV1 700 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 CEP44Q9C0F1 390 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 MTG2Q9H4K7 406 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 ZNF318Q5VUA4 2279 aa22.11■■□□□ 1.13
SNX1-206ENST00000559389 MYO18AQ92614 2054 aaKnown RBP22.11■■□□□ 1.13
SNX1-206ENST00000559389 EDDM13A0A1B0GTR0 161 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 GALR2O43603 387 aaPredicted RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 SYNCRIPO60506 623 aaKnown RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 MAFKO60675 156 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 TMCC1O94876 653 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 TDGF1P13385 188 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 MX2P20592 715 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 MSNP26038 577 aaKnown RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 DLG2Q15700 870 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 HS1BP3Q53T59 392 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 NPNTQ6UXI9 565 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 LEKR1Q6ZMV7 388 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 LRRC49Q8IUZ0 686 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 TSTD1Q8NFU3 115 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 PTPRN2Q92932 1015 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 HDAC11Q96DB2 347 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 CARD9Q9H257 536 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 POLMQ9NP87 494 aaPredicted RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 UBA2Q9UBT2 640 aaPredicted RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 SUN2Q9UH99 717 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 FCF1Q9Y324 198 aaKnown RBP22.1■■□□□ 1.13
SNX1-206ENST00000559389 JRKLQ9Y4A0 524 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 HEY1Q9Y5J3 304 aa22.1■■□□□ 1.13
SNX1-206ENST00000559389 NUP205Q92621 2012 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 CUL9Q8IWT3 2517 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 TCRBV21S2A2A0A5A6 115 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 TARSL2A2RTX5 802 aaKnown RBP22.09■■□□□ 1.13
SNX1-206ENST00000559389 SIN3BO75182 1162 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 APBB3O95704 486 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 VAV1P15498 845 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 PECAM1P16284 738 aaPredicted RBP22.09■■□□□ 1.13
SNX1-206ENST00000559389 HOXA6P31267 233 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 INO80DQ53TQ3 878 aaPredicted RBP22.09■■□□□ 1.13
SNX1-206ENST00000559389 C9orf64Q5T6V5 341 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 Q6ZVU0 165 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 METTL3Q86U44 580 aaKnown RBP22.09■■□□□ 1.13
SNX1-206ENST00000559389 C17orf53Q8N3J3 647 aaPredicted RBP22.09■■□□□ 1.13
SNX1-206ENST00000559389 HEMGNQ9BXL5 484 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 FBRSQ9HAH7 460 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 PRSS16Q9NQE7 514 aa22.09■■□□□ 1.13
SNX1-206ENST00000559389 FBXO4Q9UKT5 387 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms