RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ZBTB44Q8NCP5 570 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 RLN3Q8WXF3 142 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 NCAPGQ9BPX3 1015 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 CALN1Q9BXU9 219 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 CATSPERBQ9H7T0 1116 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 SARDHQ9UL12 918 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 GUCA1BQ9UMX6 200 aa13.37□□□□□ -0.27
CHFR-216ENST00000538235 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 PLK4O00444 970 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 FANCGO15287 622 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 HRO43593 1189 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 KDELR3O43731 214 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 ATP5BP06576 529 aaKnown RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 KRT7P08729 469 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 DESP17661 470 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 CTNNA2P26232 953 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 HOXA6P31267 233 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 GKP32189 559 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 ARL4AP40617 200 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 KIF5AQ12840 1032 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 IHHQ14623 411 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 PAFAH1B3Q15102 231 aaKnown RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 DLG2Q15700 870 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 PREPLQ4J6C6 727 aaPredicted RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 IL31Q6EBC2 164 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 SPOCD1Q6ZMY3 1216 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 ZNF557Q8N988 423 aaPredicted RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 RCOR3Q9P2K3 495 aaPredicted RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 MBD1Q9UIS9 605 aaPredicted RBP13.36□□□□□ -0.27
CHFR-216ENST00000538235 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 ADAMTS9Q9P2N4 1935 aa13.36□□□□□ -0.27
CHFR-216ENST00000538235 OTOGLQ3ZCN5 2332 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 DFFAO00273 331 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 TIMM44O43615 452 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 PRAMEF11O60813 436 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 ATG13O75143 517 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 TMCC1O94876 653 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 APBB3O95704 486 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 CCDC175P0C221 793 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 DGKEP52429 567 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 NDST2P52849 883 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 NUBP1P53384 320 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 OXCT1P55809 520 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 YBEYP58557 167 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 ZNF211Q13398 564 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 PDK2Q15119 407 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 CYTH1Q15438 398 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 PARP15Q460N3 678 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 PGBD5Q8N414 524 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 KDM1BQ8NB78 822 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 TM6SF2Q9BZW4 377 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 LUC7LQ9NQ29 371 aaKnown RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 SAE1Q9UBE0 346 aaPredicted RBP13.35□□□□□ -0.27
CHFR-216ENST00000538235 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHFR-216ENST00000538235 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 RALGAPA1Q6GYQ0 2036 aa13.35□□□□□ -0.27
CHFR-216ENST00000538235 TMEM131Q92545 1883 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
CHFR-216ENST00000538235 AXIN1O15169 862 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 INSIG1O15503 277 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 DAPK3O43293 454 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 MAFKO60675 156 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 PYGMP11217 842 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 DRD3P35462 400 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 DNA2P51530 1060 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 DYNLT1P63172 113 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 NHLH1Q02575 133 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms