RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CHRNA3P32297 505 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 NUDT1P36639 197 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 GRIA4P48058 902 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 GALCP54803 685 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 GSCP56915 257 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 TPI1P60174 286 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SIM1P81133 766 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SLC14A1Q13336 389 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 IQCB1Q15051 598 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SETMARQ53H47 684 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 C22orf39Q6P5X5 142 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 PCDH20Q8N6Y1 951 aaKnown RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 CCDC185Q8N715 623 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 PIP4K2CQ8TBX8 421 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 PTPRN2Q92932 1015 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 NTAN1Q96AB6 310 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 MYO19Q96H55 970 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 NCAPGQ9BPX3 1015 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ADAM33Q9BZ11 813 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 CEP44Q9C0F1 390 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 MAGEH1Q9H213 219 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 TNKS2Q9H2K2 1166 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 TM9SF3Q9HD45 589 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ANLNQ9NQW6 1124 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 MYO1AQ9UBC5 1043 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 CNOT8Q9UFF9 292 aaKnown RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 IL36AQ9UHA7 158 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ADAMTS1Q9UHI8 967 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ANGPTL2Q9UKU9 493 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 HS3ST2Q9Y278 367 aa9.33□□□□□ -0.92
HDAC6-232ENST00000489053 LUC7L2Q9Y383 392 aaKnown RBP9.33□□□□□ -0.92
HDAC6-232ENST00000489053 ZSCAN5CA6NGD5 496 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 NEMP1O14524 444 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ATMINO43313 823 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 BUB1O43683 1085 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 DFNA5O60443 496 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 MAGEC1O60732 1142 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 RTN2O75298 545 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 LRIG2O94898 1065 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 PCDH8O95206 1070 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 FTLP02792 175 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 GZMAP12544 262 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 SKILP12757 684 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 XPAP23025 273 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 L1CAMP32004 1257 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 SSR1P43307 286 aaKnown RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 SERPINH1P50454 418 aaKnown RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 CCT8P50990 548 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 CCR5P51681 352 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ADPRHP54922 357 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 HDAC4P56524 1084 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 RPL7AP62424 266 aaKnown RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 NRG1Q02297 640 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 RAD51Q06609 339 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 CNTN1Q12860 1018 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 FOXC1Q12948 553 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 PTP4A2Q12974 167 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 NR1I3Q14994 352 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 HLA-BQ31612 363 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 CFAP58Q5T655 872 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 N4BP2L1Q5TBK1 243 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 TRNP1Q6NT89 227 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 FBXL19Q6PCT2 694 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 IRF2BP2Q7Z5L9 587 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 NAXDQ8IW45 347 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ZNF683Q8IZ20 524 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 AADATQ8N5Z0 425 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 FRS2Q8WU20 508 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 BAP1Q92560 729 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 CENPIQ92674 756 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ALG14Q96F25 216 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 FAM129BQ96TA1 746 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 TSPY26PQ9H489 355 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ZDHHC6Q9H6R6 413 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 GDF3Q9NR23 364 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 TMEM248Q9NWD8 314 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 AIPL1Q9NZN9 384 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 IFNKQ9P0W0 207 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 SERGEFQ9UGK8 458 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 PPM1HQ9ULR3 514 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 ANKRD6Q9Y2G4 727 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC6-232ENST00000489053 OR51B4Q9Y5P0 310 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
HDAC6-232ENST00000489053 TPRP12270 2363 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 A0A1W2PPC4 97 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 A0A1W2PQJ5 194 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 EIF3CLB5ME19 914 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms