RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FCF1Q9Y324 198 aaKnown RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 TNRC6BQ9UPQ9 1833 aaKnown RBP7.05□□□□□ -1.28
BRCA1-215ENST00000478531 CEP250Q9BV73 2442 aa7.05□□□□□ -1.28
BRCA1-215ENST00000478531 CCDC163A0A0D9SF12 145 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 A0A0U1RQJ8 604 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 LRRD1A4D1F6 860 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 MAP3K13O43283 966 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 BUB1BO60566 1050 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 RNASEH1O60930 286 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 KRT1P04264 644 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 BCKDHBP21953 392 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 COMTP21964 271 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 AMPD1P23109 780 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 PLA2G5P39877 138 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 PSMD8P48556 350 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 SERPINH1P50454 418 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 VAV2P52735 878 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ARF5P84085 180 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DPYSL3Q14195 570 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 POM121L1PQ3SYA9 428 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 PARP15Q460N3 678 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ODF2Q5BJF6 829 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 C9orf64Q5T6V5 341 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF776Q68DI1 518 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 RETSATQ6NUM9 610 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 C22orf39Q6P5X5 142 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TMCO3Q6UWJ1 677 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 POLNQ7Z5Q5 900 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DAAM2Q86T65 1068 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 KBTBD6Q86V97 674 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 MMAAQ8IVH4 418 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 NPWQ8N729 165 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 KDM1BQ8NB78 822 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 GANCQ8TET4 914 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TM6SF2Q9BZW4 377 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 LACRTQ9GZZ8 138 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 KLC2Q9H0B6 622 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 EPC1Q9H2F5 836 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TNKS2Q9H2K2 1166 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ETNK2Q9NVF9 386 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TRIM10Q9UDY6 481 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 HS3ST2Q9Y278 367 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 A0A0A6YYK5 440 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 MACROD2A1Z1Q3 448 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 PRR23AA6NEV1 266 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 WASH4PA8MWX3 477 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ATP9BO43861 1147 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ZMPSTE24O75844 475 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 IL1BP01584 269 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 LMNAP02545 664 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DNTTP04053 509 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 CNR2P34972 360 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 P2RY2P41231 377 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TPMTP51580 245 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF135P52742 658 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 SERINC3Q13530 473 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ELAVL3Q14576 367 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 MAP7D1Q3KQU3 841 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 TTC31Q49AM3 519 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGAP36Q6ZRI8 547 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ARMCX6Q7L4S7 300 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 UMODL1-AS1Q8N2C9 162 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DEFB119Q8N690 84 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 CCDC112Q8NEF3 446 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 GRIN3AQ8TCU5 1115 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ANP32BQ92688 251 aaKnown RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 PTPRN2Q92932 1015 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-215ENST00000478531 SLC39A8Q9C0K1 460 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 LRRC19Q9H756 370 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DONSONQ9NYP3 566 aa7.04□□□□□ -1.28
BRCA1-215ENST00000478531 DOCK9Q9BZ29 2069 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TP53BP1Q12888 1972 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TARSL2A2RTX5 802 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGAP42A6NI28 874 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MID1O15344 667 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGAP6O43182 974 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 KDELR3O43731 214 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MFSD11O43934 449 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 GFRA3O60609 400 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF217O75362 1048 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TMCC1O94876 653 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MAP3K6O95382 1288 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 PTMAP06454 111 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 SERPINB6P35237 376 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 SLC1A1P43005 524 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RECQLP46063 649 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 HCAR3P49019 387 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MRE11P49959 708 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 PAPOLAP51003 745 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 NDST2P52849 883 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms