RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SEL1LQ9UBV2 794 aa9.73□□□□□ -0.85
APP-213ENST00000464867 PISDQ9UG56 409 aa9.73□□□□□ -0.85
APP-213ENST00000464867 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
APP-213ENST00000464867 U3KQA8 63 aa9.73□□□□□ -0.85
APP-213ENST00000464867 ZFHX3Q15911 3703 aa9.73□□□□□ -0.85
APP-213ENST00000464867 OTOGQ6ZRI0 2925 aa9.72□□□□□ -0.85
APP-213ENST00000464867 EDDM13A0A1B0GTR0 161 aa9.72□□□□□ -0.85
APP-213ENST00000464867 C10orf142B7Z368 130 aa9.72□□□□□ -0.85
APP-213ENST00000464867 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
APP-213ENST00000464867 SLC7A4O43246 635 aa9.72□□□□□ -0.85
APP-213ENST00000464867 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
APP-213ENST00000464867 SLC26A4O43511 780 aa9.72□□□□□ -0.85
APP-213ENST00000464867 JAK2O60674 1132 aa9.72□□□□□ -0.85
APP-213ENST00000464867 KRT7P08729 469 aa9.72□□□□□ -0.85
APP-213ENST00000464867 FAM200BP0CF97 657 aa9.72□□□□□ -0.85
APP-213ENST00000464867 TNNI1P19237 187 aa9.72□□□□□ -0.85
APP-213ENST00000464867 CD82P27701 267 aa9.72□□□□□ -0.85
APP-213ENST00000464867 KLRB1Q12918 225 aa9.72□□□□□ -0.85
APP-213ENST00000464867 ESPL1Q14674 2120 aa9.72□□□□□ -0.85
APP-213ENST00000464867 NAA30Q147X3 362 aaPredicted RBP9.72□□□□□ -0.85
APP-213ENST00000464867 TMEM119Q4V9L6 283 aa9.72□□□□□ -0.85
APP-213ENST00000464867 C9orf64Q5T6V5 341 aa9.72□□□□□ -0.85
APP-213ENST00000464867 RNF219Q5W0B1 726 aaPredicted RBP9.72□□□□□ -0.85
APP-213ENST00000464867 SYT9Q86SS6 491 aa9.72□□□□□ -0.85
APP-213ENST00000464867 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
APP-213ENST00000464867 DCP2Q8IU60 420 aaKnown RBP9.72□□□□□ -0.85
APP-213ENST00000464867 WDR49Q8IV35 697 aa9.72□□□□□ -0.85
APP-213ENST00000464867 CCDC117Q8IWD4 279 aaPredicted RBP9.72□□□□□ -0.85
APP-213ENST00000464867 FUKQ8N0W3 1084 aa9.72□□□□□ -0.85
APP-213ENST00000464867 ZMIZ2Q8NF64 920 aa9.72□□□□□ -0.85
APP-213ENST00000464867 SLC2A14Q8TDB8 520 aa9.72□□□□□ -0.85
APP-213ENST00000464867 JAKMIP2Q96AA8 810 aa9.72□□□□□ -0.85
APP-213ENST00000464867 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
APP-213ENST00000464867 HSH2DQ96JZ2 352 aa9.72□□□□□ -0.85
APP-213ENST00000464867 CGRRF1Q99675 332 aa9.72□□□□□ -0.85
APP-213ENST00000464867 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
APP-213ENST00000464867 MDFIQ99750 246 aa9.72□□□□□ -0.85
APP-213ENST00000464867 PCIF1Q9H4Z3 704 aa9.72□□□□□ -0.85
APP-213ENST00000464867 MARCH2Q9P0N8 246 aa9.72□□□□□ -0.85
APP-213ENST00000464867 CEP83Q9Y592 693 aa9.72□□□□□ -0.85
APP-213ENST00000464867 GPC6Q9Y625 555 aaPredicted RBP9.72□□□□□ -0.85
APP-213ENST00000464867 CSNK1G3Q9Y6M4 447 aa9.72□□□□□ -0.85
APP-213ENST00000464867 A0A1W2PQ27 194 aa9.71□□□□□ -0.86
APP-213ENST00000464867 A0A1W2PQ64 194 aa9.71□□□□□ -0.86
APP-213ENST00000464867 A0A1W2PQC6 194 aa9.71□□□□□ -0.86
APP-213ENST00000464867 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
APP-213ENST00000464867 BEST1O76090 585 aa9.71□□□□□ -0.86
APP-213ENST00000464867 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
APP-213ENST00000464867 SLFN14P0C7P3 912 aa9.71□□□□□ -0.86
APP-213ENST00000464867 SLC6A4P31645 630 aa9.71□□□□□ -0.86
APP-213ENST00000464867 AKT2P31751 481 aa9.71□□□□□ -0.86
APP-213ENST00000464867 ATICP31939 592 aa9.71□□□□□ -0.86
APP-213ENST00000464867 NNMTP40261 264 aa9.71□□□□□ -0.86
APP-213ENST00000464867 UBA7P41226 1012 aa9.71□□□□□ -0.86
APP-213ENST00000464867 ZNF542PQ5EBM4 170 aa9.71□□□□□ -0.86
APP-213ENST00000464867 L1TD1Q5T7N2 865 aaKnown RBP9.71□□□□□ -0.86
APP-213ENST00000464867 TMEM164Q5U3C3 297 aa9.71□□□□□ -0.86
APP-213ENST00000464867 KIAA0907Q7Z7F0 614 aaPredicted RBP9.71□□□□□ -0.86
APP-213ENST00000464867 ACOT1Q86TX2 421 aa9.71□□□□□ -0.86
APP-213ENST00000464867 ZFAND4Q86XD8 727 aa9.71□□□□□ -0.86
APP-213ENST00000464867 FAM217AQ8IXS0 508 aa9.71□□□□□ -0.86
APP-213ENST00000464867 ARHGAP18Q8N392 663 aa9.71□□□□□ -0.86
APP-213ENST00000464867 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
APP-213ENST00000464867 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.86
APP-213ENST00000464867 HEXIM2Q96MH2 286 aaKnown RBP9.71□□□□□ -0.86
APP-213ENST00000464867 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
APP-213ENST00000464867 CCDC3Q9BQI4 270 aa9.71□□□□□ -0.86
APP-213ENST00000464867 CBWD1Q9BRT8 395 aa9.71□□□□□ -0.86
APP-213ENST00000464867 SLC12A9Q9BXP2 914 aa9.71□□□□□ -0.86
APP-213ENST00000464867 PHACTR1Q9C0D0 580 aa9.71□□□□□ -0.86
APP-213ENST00000464867 CA5BQ9Y2D0 317 aa9.71□□□□□ -0.86
APP-213ENST00000464867 NF1P21359 2839 aa9.7□□□□□ -0.86
APP-213ENST00000464867 CSMD1Q96PZ7 3565 aa9.7□□□□□ -0.86
APP-213ENST00000464867 PRAMEF33A0A0G2JMD5 474 aa9.7□□□□□ -0.86
APP-213ENST00000464867 TPP1O14773 563 aa9.7□□□□□ -0.86
APP-213ENST00000464867 SLC31A1O15431 190 aa9.7□□□□□ -0.86
APP-213ENST00000464867 PLRG1O43660 514 aaKnown RBP9.7□□□□□ -0.86
APP-213ENST00000464867 PRAMEF10O60809 474 aa9.7□□□□□ -0.86
APP-213ENST00000464867 PHACTR2O75167 634 aa9.7□□□□□ -0.86
APP-213ENST00000464867 GCNT3O95395 438 aa9.7□□□□□ -0.86
APP-213ENST00000464867 MOCS3O95396 460 aa9.7□□□□□ -0.86
APP-213ENST00000464867 SRPRAP08240 638 aaKnown RBP9.7□□□□□ -0.86
APP-213ENST00000464867 DLATP10515 647 aaKnown RBP9.7□□□□□ -0.86
APP-213ENST00000464867 CCDC130P13994 396 aa9.7□□□□□ -0.86
APP-213ENST00000464867 HGFP14210 728 aa9.7□□□□□ -0.86
APP-213ENST00000464867 WT1P19544 449 aaPredicted RBP9.7□□□□□ -0.86
APP-213ENST00000464867 GNLYP22749 145 aa9.7□□□□□ -0.86
APP-213ENST00000464867 ADORA2BP29275 332 aa9.7□□□□□ -0.86
APP-213ENST00000464867 CD70P32970 193 aa9.7□□□□□ -0.86
APP-213ENST00000464867 MLLT10P55197 1068 aa9.7□□□□□ -0.86
APP-213ENST00000464867 KCNA1Q09470 495 aa9.7□□□□□ -0.86
APP-213ENST00000464867 SEPT6Q14141 434 aa9.7□□□□□ -0.86
APP-213ENST00000464867 ELAVL3Q14576 367 aaKnown RBP9.7□□□□□ -0.86
APP-213ENST00000464867 ME3Q16798 604 aa9.7□□□□□ -0.86
APP-213ENST00000464867 BMT2Q1RMZ1 405 aa9.7□□□□□ -0.86
APP-213ENST00000464867 LACTB2Q53H82 288 aaPredicted RBP9.7□□□□□ -0.86
APP-213ENST00000464867 FAM46CQ5VWP2 391 aa9.7□□□□□ -0.86
APP-213ENST00000464867 CAPRIN2Q6IMN6 1127 aaKnown RBP9.7□□□□□ -0.86
APP-213ENST00000464867 CCDC186Q7Z3E2 898 aa9.7□□□□□ -0.86
APP-213ENST00000464867 ZC3H18Q86VM9 953 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms