RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ACVRL1P37023 503 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 NNMTP40261 264 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 CSKP41240 450 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 GRIA2P42262 883 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PTGIRP43119 386 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 KCNJ1P48048 391 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 NSUN2Q08J23 767 aaKnown RBP eCLIP10.89□□□□□ -0.67
RTF1-202ENST00000462276 PARP6Q2NL67 630 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PITRM1Q5JRX3 1037 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 RALGPS1Q5JS13 557 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PCGF5Q86SE9 256 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 JAMLQ86YT9 394 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 EIF1ADQ8N9N8 165 aaKnown RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 OR7D4Q8NG98 312 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 UCMAQ8WVF2 138 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 ISG20Q96AZ6 181 aaKnown RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 TEKT5Q96M29 485 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PNKPQ96T60 521 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 ERP44Q9BS26 406 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 PDFQ9HBH1 243 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 HS3ST2Q9Y278 367 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 NEU2Q9Y3R4 380 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 GOLGA6CA6NDK9 693 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 GOLGA6BA6NDN3 693 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 OTOL1A6NHN0 477 aaPredicted RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ERI2A8K979 691 aaKnown RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 RNF103O00237 685 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 MAN2B1O00754 1011 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PSMD3O43242 534 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 RAD51CO43502 376 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 MAP3K6O95382 1288 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PEX11BO96011 259 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 IFNB1P01574 187 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 JCHAINP01591 159 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 KRT14P02533 472 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 DLDP09622 509 aaKnown RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 GOLGA6DP0CG33 693 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 IL9P15248 144 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ITIH2P19823 946 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PTPN3P26045 913 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 MZF1P28698 734 aaPredicted RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 CD70P32970 193 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 FDFT1P37268 417 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ADCY8P40145 1251 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 TNFRSF4P43489 277 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 MAPK8P45983 427 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 CDK16Q00536 496 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ECT2LQ008S8 904 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 TFF2Q03403 129 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ZP2Q05996 745 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 WASHC5Q12768 1159 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PTK6Q13882 451 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 LBRQ14739 615 aaKnown RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ARHGEF18Q6ZSZ5 1173 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 TP53INP2Q8IXH6 220 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 NOA1Q8NC60 698 aaKnown RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 OR52K2Q8NGK3 314 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
RTF1-202ENST00000462276 SEC14L1Q92503 715 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PSKH2Q96QS6 385 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 FAM118BQ9BPY3 351 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 LRRC1Q9BTT6 524 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 CEP44Q9C0F1 390 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 RBM22Q9NW64 420 aaKnown RBP eCLIP10.88□□□□□ -0.67
RTF1-202ENST00000462276 ELOVL2Q9NXB9 296 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 GOLGA6AQ9NYA3 693 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
RTF1-202ENST00000462276 VPS51Q9UID3 782 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 SLC25A13Q9UJS0 675 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 CLEC4EQ9ULY5 219 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 PLA2G4CQ9UP65 541 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 DENND4CQ5VZ89 1909 aa10.88□□□□□ -0.67
RTF1-202ENST00000462276 TBC1D3BA6NDS4 549 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 J3KR12 359 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 KCNK1O00180 336 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 TTI1O43156 1089 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 ANXA9O76027 345 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 APODP05090 189 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 VAV1P15498 845 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 DRD1P21728 446 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 SP100P23497 879 aaPredicted RBP10.87□□□□□ -0.67
RTF1-202ENST00000462276 OPRD1P41143 372 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 MMP13P45452 471 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 CSNK1DP48730 415 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
RTF1-202ENST00000462276 CAV1Q03135 178 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 CUL1Q13616 776 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 ZNF235Q14590 738 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 SLC14A2Q15849 920 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 ANKRD20A2Q5SQ80 823 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 ANKRD20A1Q5TYW2 823 aa10.87□□□□□ -0.67
RTF1-202ENST00000462276 ANKRD20A3Q5VUR7 823 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms