RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SERAC1Q96JX3 654 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 FCRL3Q96P31 734 aaPredicted RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 KLF6Q99612 283 aaPredicted RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 SSX2IPQ9Y2D8 614 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 RPS6KL1Q9Y6S9 549 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 TGM5O43548 720 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 CA4P22748 312 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 GBP2P32456 591 aaPredicted RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 GEMP55040 296 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 YBEYP58557 167 aaPredicted RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 SERINC3Q13530 473 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 QPCTQ16769 361 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 TMEM240Q5SV17 173 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 ZNF354CQ86Y25 554 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 WBP2Q969T9 261 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 PPP1R2P1Q96PQ5 205 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 TBL1YQ9BQ87 522 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 PLXNA4Q9HCM2 1894 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.98■■□□□ 1.91
LDB1-202ENST00000425280 TRIM49D1C9J1S8 452 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 GOLGA8RI6L899 631 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 F11P03951 625 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 TPH1P17752 444 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 SLC10A7Q0GE19 358 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 ITIH5Q86UX2 942 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 BANPQ8N9N5 519 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 IPMKQ8NFU5 416 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 PABPC5Q96DU9 382 aaKnown RBP26.98■■□□□ 1.91
LDB1-202ENST00000425280 KLHL5Q96PQ7 755 aa26.98■■□□□ 1.91
LDB1-202ENST00000425280 ZFP37Q9Y6Q3 630 aaPredicted RBP26.98■■□□□ 1.91
LDB1-202ENST00000425280 AP3B1O00203 1094 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 KRT37O76014 449 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 SNRPAP09012 282 aaKnown RBP26.97■■□□□ 1.91
LDB1-202ENST00000425280 IRF1P10914 325 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 ACVRL1P37023 503 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 MARC1Q5VT66 337 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 SH2D5Q6ZV89 423 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 MARK2Q7KZI7 788 aaKnown RBP26.97■■□□□ 1.91
LDB1-202ENST00000425280 TMEM135Q86UB9 458 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 LRRC34Q8IZ02 419 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 ALKBH8Q96BT7 664 aaKnown RBP26.97■■□□□ 1.91
LDB1-202ENST00000425280 PRICKLE1Q96MT3 831 aaPredicted RBP26.97■■□□□ 1.91
LDB1-202ENST00000425280 IL22Q9GZX6 179 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 IL21Q9HBE4 155 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 ATP9BO43861 1147 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 ASMTLO95671 621 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 CXCL14O95715 111 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 ADRA1AP35348 466 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 IL10RBQ08334 325 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 LGSNQ5TDP6 509 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 TEX26Q8N6G2 289 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 FICDQ9BVA6 458 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 SLC25A51Q9H1U9 297 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 NT5MQ9NPB1 228 aa26.97■■□□□ 1.91
LDB1-202ENST00000425280 AGO1Q9UL18 857 aaKnown RBP26.97■■□□□ 1.91
LDB1-202ENST00000425280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.96■■□□□ 1.91
LDB1-202ENST00000425280 RPS24P62847 133 aaKnown RBP26.96■■□□□ 1.91
LDB1-202ENST00000425280 SLC1A5Q15758 541 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 RABGAP1LQ5R372 815 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 CPLX4Q7Z7G2 160 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 ZNF669Q96BR6 464 aaPredicted RBP26.96■■□□□ 1.91
LDB1-202ENST00000425280 RETREG1Q9H6L5 497 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 SLC17A6Q9P2U8 582 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 MAGEB16A2A368 324 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 H3BNC9 293 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 USP1O94782 785 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 CDH4P55283 916 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 SLC18A2Q05940 514 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 TNK2Q07912 1038 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 ANKRD20A4Q4UJ75 823 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 DENND5AQ6IQ26 1287 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 HERC6Q8IVU3 1022 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 CDKL2Q92772 493 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 ZFRQ96KR1 1074 aaKnown RBP26.96■■□□□ 1.91
LDB1-202ENST00000425280 SLC22A12Q96S37 553 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 CYP2S1Q96SQ9 504 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 TRPC7Q9HCX4 862 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 SMPD4Q9NXE4 827 aa26.96■■□□□ 1.91
LDB1-202ENST00000425280 OBSL1O75147 1896 aa26.95■■□□□ 1.91
LDB1-202ENST00000425280 FAM237BA0A1B0GVD1 139 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 PMPCBO75439 489 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 KRT38O76015 456 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 MBL2P11226 248 aaPredicted RBP26.95■■□□□ 1.9
LDB1-202ENST00000425280 MGAT5Q09328 741 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 BMPR2Q13873 1038 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 LILRA6Q6PI73 481 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 TMC7Q7Z402 723 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 NSMCE1Q8WV22 266 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 CERS2Q96G23 380 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 MRGPRX2Q96LB1 330 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 RAD9AQ99638 391 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 PAIP2Q9BPZ3 127 aaKnown RBP26.95■■□□□ 1.9
LDB1-202ENST00000425280 IL1RAPL1Q9NZN1 696 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 SOX13Q9UN79 622 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 FAM169AQ9Y6X4 670 aa26.95■■□□□ 1.9
LDB1-202ENST00000425280 ZCWPW2A0A1B0GU75 182 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 HMX2A2RU54 273 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 ZWINTO95229 277 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 VIMP08670 466 aaKnown RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 ERVK-10P10266 1014 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms