RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 B4GALNT4Q76KP1 1039 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 ADIPOR2Q86V24 386 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 C12orf40Q86WS4 652 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 FAM71DQ8N9W8 422 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 CCHCR1Q8TD31 782 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 NSMCE1Q8WV22 266 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 CASKIN2Q8WXE0 1202 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 C8orf33Q9H7E9 229 aaPredicted RBP13.88□□□□□ -0.19
PRPF18-201ENST00000320054 PCDH9Q9HC56 1237 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 SLC2A4RGQ9NR83 387 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 VPS51Q9UID3 782 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 TRHDEQ9UKU6 1024 aa13.88□□□□□ -0.19
PRPF18-201ENST00000320054 A0A0A0MRY4 1105 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 KCNK1O00180 336 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 TIMM44O43615 452 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 OPHN1O60890 802 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 ASGR2P07307 311 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 SRFP11831 508 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 GLDCP23378 1020 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 PTPN3P26045 913 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 ARF5P84085 180 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 PPP1R7Q15435 360 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 INO80DQ53TQ3 878 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 TEX35Q5T0J7 233 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 METTL3Q86U44 580 aaKnown RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 CCDC89Q8N998 374 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 CHFRQ96EP1 664 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 MSANTD3Q96H12 275 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 SPATA13Q96N96 652 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 PNKPQ96T60 521 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 PAK5Q9P286 719 aa13.87□□□□□ -0.19
PRPF18-201ENST00000320054 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-201ENST00000320054 BHMG1C9JSJ3 638 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 TRIM24O15164 1050 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 SNAP91O60641 907 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 CD160O95971 181 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 IFNB1P01574 187 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 JCHAINP01591 159 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ASLP04424 464 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 POLR2EP19388 210 aaKnown RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 RPL22P35268 128 aaKnown RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ACTN2P35609 894 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ZBTB17Q13105 803 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 LBRQ14739 615 aaKnown RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 GEN1Q17RS7 908 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ANKRD20A2Q5SQ80 823 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ANKRD20A1Q5TYW2 823 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ANKRD20A3Q5VUR7 823 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 MBLAC2Q68D91 279 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 BBS5Q8N3I7 341 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 TERB1Q8NA31 727 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 GLIS1Q8NBF1 620 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 TTC8Q8TAM2 541 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 UBXN4Q92575 508 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 EXOC4Q96A65 974 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 TEKT5Q96M29 485 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ERP44Q9BS26 406 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 RAB17Q9H0T7 212 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 HAUS2Q9NVX0 235 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 RBM22Q9NW64 420 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 SEPT3Q9UH03 358 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 SPTBN5Q9NRC6 3674 aaKnown RBP13.86□□□□□ -0.19
PRPF18-201ENST00000320054 F5P12259 2224 aa13.86□□□□□ -0.19
PRPF18-201ENST00000320054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 SPECC1L-ADORA2AF8WAN1 911 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 APODP05090 189 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 ATP5BP06576 529 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 SRPRAP08240 638 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 ETS1P14921 441 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 CTHP32929 405 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 HSPA9P38646 679 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 GRIA2P42262 883 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 MMP13P45452 471 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 SERPINH1P50454 418 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 DRG2P55039 364 aaKnown RBP13.85□□□□□ -0.19
PRPF18-201ENST00000320054 ECT2LQ008S8 904 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 SLC10A7Q0GE19 358 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 E2F5Q15329 346 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 TMEM215Q68D42 235 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 DUPD1Q68J44 220 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 ITPRIPL1Q6GPH6 555 aa13.85□□□□□ -0.19
PRPF18-201ENST00000320054 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms