RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 PEX11BO96011 259 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 PABPC1P11940 636 aaKnown RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 GARSP41250 739 aaKnown RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 DGKGP49619 791 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 OTUD4Q01804 1114 aaKnown RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 ZNF33AQ06730 810 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 POLD3Q15054 466 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 PRKD1Q15139 912 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 LONRF2Q1L5Z9 754 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 FUT11Q495W5 492 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 RNF219Q5W0B1 726 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 C1orf228Q6PIY5 440 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 TXNDC11Q6PKC3 985 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 RALGPS2Q86X27 583 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 APCDD1Q8J025 514 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 C12orf50Q8NA57 414 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 TTC8Q8TAM2 541 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 ZNF592Q92610 1267 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 P3H4Q92791 437 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 FATE1Q969F0 183 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 NKD2Q969F2 451 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 TTC17Q96AE7 1141 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 MSANTD3Q96H12 275 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 NAP1L3Q99457 506 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 FRMD8P1Q9BZ68 369 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 HEBP1Q9NRV9 189 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 ABCB8Q9NUT2 735 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 DNAJC17Q9NVM6 304 aaKnown RBP18.7■□□□□ 0.58
H3F3B-206ENST00000587560 GGA2Q9UJY4 613 aa18.7■□□□□ 0.58
H3F3B-206ENST00000587560 TPRP12270 2363 aaKnown RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 NCAM2O15394 837 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 KDELR3O43731 214 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 MAFKO60675 156 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 URI1O94763 535 aaPredicted RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 CD160O95971 181 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 ETFBP38117 255 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 PAPOLAP51003 745 aaKnown RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 PPIDQ08752 370 aaKnown RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 OASLQ15646 514 aaKnown RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 CCNG2Q16589 344 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 GEN1Q17RS7 908 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 PITRM1Q5JRX3 1037 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 GRAMD4Q6IC98 578 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 ARHGAP36Q6ZRI8 547 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 DCAF4L2Q8NA75 395 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 WFIKKN2Q8TEU8 576 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 EZH1Q92800 747 aaPredicted RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 CAPZA3Q96KX2 299 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 PRRX2Q99811 253 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 L2HGDHQ9H9P8 463 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 FBRSL1Q9HCM7 1045 aaKnown RBP18.69■□□□□ 0.58
H3F3B-206ENST00000587560 DEC1Q9P2X7 70 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 HEY1Q9Y5J3 304 aa18.69■□□□□ 0.58
H3F3B-206ENST00000587560 ARHGAP42A6NI28 874 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PRRT4C9JH25 899 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 LIASO43766 372 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PRAMEF11O60813 436 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 MAP3K6O95382 1288 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 MX2P20592 715 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 VASPP50552 380 aaPredicted RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PDK1Q15118 436 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 WHAMMP3Q1A5X7 153 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 SLC44A4Q53GD3 710 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 BZW1Q7L1Q6 419 aaKnown RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 ADAT2Q7Z6V5 191 aaKnown RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 SUGP1Q8IWZ8 645 aaKnown RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 AHI1Q8N157 1196 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 ZNF687Q8N1G0 1237 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 TERB1Q8NA31 727 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 HAUS1Q96CS2 278 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 QKIQ96PU8 341 aaKnown RBP eCLIP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PNKPQ96T60 521 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 BRD8Q9H0E9 1235 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 HCN2Q9UL51 889 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 PIAS3Q9Y6X2 628 aa18.68■□□□□ 0.58
H3F3B-206ENST00000587560 MYO18AQ92614 2054 aaKnown RBP18.68■□□□□ 0.58
H3F3B-206ENST00000587560 HACD1B0YJ81 288 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 GLDCP23378 1020 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 CCNCP24863 283 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 GALK1P51570 392 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 ARF5P84085 180 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 TMEM196Q5HYL7 178 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 ASCL5Q7RTU5 278 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 CCDC117Q8IWD4 279 aaPredicted RBP18.67■□□□□ 0.58
H3F3B-206ENST00000587560 SFTPA1Q8IWL2 248 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 UBALD2Q8IYN6 164 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 C1orf54Q8WWF1 131 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 ATG4AQ8WYN0 398 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 MAML1Q92585 1016 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 ACDQ96AP0 544 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 LGMNQ99538 433 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 P2RY13Q9BPV8 354 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 USP29Q9HBJ7 922 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 WNT16Q9UBV4 365 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 IPO11Q9UI26 975 aaKnown RBP18.67■□□□□ 0.58
H3F3B-206ENST00000587560 VPS51Q9UID3 782 aa18.67■□□□□ 0.58
H3F3B-206ENST00000587560 DNPEPQ9ULA0 475 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms