RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SMAD6O43541 496 aaKnown RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 OPHN1O60890 802 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 WNT1P04628 370 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 SYPP08247 313 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 GNSP15586 552 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 PTMSP20962 102 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 GLDCP23378 1020 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 CD27P26842 260 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 PTPN9P43378 593 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 PSMD8P48556 350 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 CSNK1EP49674 416 aaKnown RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 ADPRHP54922 357 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 NRG1Q02297 640 aaPredicted RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 ZNF177Q13360 481 aaPredicted RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 KIF19Q2TAC6 998 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 FAM72AQ5TYM5 149 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 FAM72DQ6L9T8 149 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 NCEH1Q6PIU2 408 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 Q6ZVU0 165 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 IRF2BP2Q7Z5L9 587 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 NLRP14Q86W24 1093 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 FAM72BQ86X60 149 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 ZDHHC5Q9C0B5 715 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 TTYH3Q9C0H2 523 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 NDFIP2Q9NV92 336 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 ANGPTL2Q9UKU9 493 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 PPM1HQ9ULR3 514 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 TP53BP1Q12888 1972 aaPredicted RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 MAP1BP46821 2468 aaKnown RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 SPAARA0A1B0GVQ0 90 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 RHOCP08134 193 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 CCDC172P0C7W6 258 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 FERP16591 822 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 C5AR1P21730 350 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 RFC1P35251 1148 aaPredicted RBP17.75■□□□□ 0.43
SMG6-212ENST00000573153 NSFP46459 744 aaKnown RBP17.75■□□□□ 0.43
SMG6-212ENST00000573153 GRIA4P48058 902 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 PPP2CBP62714 309 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 PPP2CAP67775 309 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 ARF5P84085 180 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 ATP11AP98196 1134 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 SLC14A1Q13336 389 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 DLG2Q15700 870 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 AGBL4Q5VU57 503 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 TFAP2DQ7Z6R9 452 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 SETD3Q86TU7 594 aaPredicted RBP17.75■□□□□ 0.43
SMG6-212ENST00000573153 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 OR7D4Q8NG98 312 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 AGPAT1Q99943 283 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 PPARGC1AQ9UBK2 798 aaKnown RBP17.75■□□□□ 0.43
SMG6-212ENST00000573153 VPS28Q9UK41 221 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 SNX11Q9Y5W9 270 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 USP24Q9UPU5 2620 aa17.75■□□□□ 0.43
SMG6-212ENST00000573153 CEP295Q9C0D2 2601 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 A0A1W2PPC4 97 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 A0A1W2PR77 199 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 MCF2LO15068 1137 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 LATO43561 262 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 SH3BP5O60239 455 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 RNASEH2AO75792 299 aaKnown RBP17.74■□□□□ 0.43
SMG6-212ENST00000573153 FSBPO95073 299 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ADH1BP00325 375 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 CALB1P05937 261 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ZNF883P0CG24 379 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 GOT1P17174 413 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 SPINK2P20155 84 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ADRA1BP35368 520 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 CTSKP43235 329 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 TAS2R38P59533 333 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
SMG6-212ENST00000573153 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 WDR59Q6PJI9 974 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 STRADAQ7RTN6 431 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 HDDC3Q8N4P3 179 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 OR2A12Q8NGT7 310 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 OR2T34Q8NGX1 318 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 SLC6A18Q96N87 628 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 NAP1L5Q96NT1 182 aaPredicted RBP17.74■□□□□ 0.43
SMG6-212ENST00000573153 TAS2R14Q9NYV8 317 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ADAM22Q9P0K1 906 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ARHGAP20Q9P2F6 1191 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
SMG6-212ENST00000573153 AKAP13Q12802 2813 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 ALOX15BO15296 676 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 CCR5P51681 352 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 AFF3P51826 1226 aaKnown RBP17.73■□□□□ 0.43
SMG6-212ENST00000573153 ATXN3P54252 364 aaPredicted RBP17.73■□□□□ 0.43
SMG6-212ENST00000573153 OGDHQ02218 1023 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 HLA-BQ31612 363 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 NAXDQ8IW45 347 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 CHST14Q8NCH0 376 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 SNX19Q92543 992 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 EDEM3Q9BZQ6 932 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 OSBPL2Q9H1P3 480 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 RETREG1Q9H6L5 497 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 GAREM1Q9H706 876 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 PCOLCE2Q9UKZ9 415 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 KNL1Q8NG31 2342 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms