RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SMC6Q96SB8 1091 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 KLF6Q99612 283 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 PRMT1Q99873 361 aaKnown RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 SPON2Q9BUD6 331 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 NOL6Q9H6R4 1146 aaKnown RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 EIF2B3Q9NR50 452 aaKnown RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 TMEM248Q9NWD8 314 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 SYBUQ9NX95 663 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 IL1RAPL1Q9NZN1 696 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 BFARQ9NZS9 450 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 PPARGC1AQ9UBK2 798 aaKnown RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 UXTQ9UBK9 157 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 ZFP37Q9Y6Q3 630 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 KIAA1671Q9BY89 1806 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 A0A1W2PPM1 405 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 HIDE1A8MVS5 230 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 SHOX2O60902 331 aaPredicted RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 PMPCBO75439 489 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 FAM155BO75949 473 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 STC2O76061 302 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 KLKB1P03952 638 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 CKMP06732 381 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 ADH1AP07327 375 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 C8AP07357 584 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 HDCP19113 662 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 HTRA4P83105 476 aaPredicted RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 SMAD3P84022 425 aaKnown RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 CYP4F8P98187 520 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 SF3A3Q12874 501 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMG1-215ENST00000568239 ANO4Q32M45 955 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 TNFAIP8L3Q5GJ75 292 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 LRRC6Q86X45 466 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 ZNF683Q8IZ20 524 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 UNC5BQ8IZJ1 945 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 UMODL1-AS1Q8N2C9 162 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 MAB21L3Q8N8X9 362 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 GSDMBQ8TAX9 411 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 GDAP1Q8TB36 358 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 MAML1Q92585 1016 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 ZNF419Q96HQ0 510 aaPredicted RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 TSGA13Q96PP4 275 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 SLC22A12Q96S37 553 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 RAD9AQ99638 391 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 GORASP1Q9BQQ3 440 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 MLPHQ9BV36 600 aaPredicted RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 FSD1LQ9BXM9 530 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 ATXN3LQ9H3M9 355 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 TRABDQ9H4I3 376 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 ZNF334Q9HCZ1 680 aaPredicted RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 NT5MQ9NPB1 228 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 FNIP2Q9P278 1114 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 LGALS13Q9UHV8 139 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 RPS6KL1Q9Y6S9 549 aa7.21□□□□□ -1.26
SMG1-215ENST00000568239 NYNRINQ9P2P1 1898 aaKnown RBP7.21□□□□□ -1.26
SMG1-215ENST00000568239 TTC24A2A3L6 582 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 NDUFAB1O14561 156 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 HLA-DQB2P05538 268 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MLNP12872 115 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MYOGP15173 224 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 KRT4P19013 534 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ACVRL1P37023 503 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MAGEA3P43357 314 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 RENBPP51606 427 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 NDST2P52849 883 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CREMQ03060 361 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ZNF33AQ06730 810 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 FAM133BQ5BKY9 247 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 MARC1Q5VT66 337 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SPRED2Q7Z698 418 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 TRABD2AQ86V40 505 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 KREMEN2Q8NCW0 462 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 POF1BQ8WVV4 589 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 OXNAD1Q96HP4 312 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 LBHD1Q9BQE6 289 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 EMILIN2Q9BXX0 1053 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 GLOD4Q9HC38 313 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 NKIRAS1Q9NYS0 192 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 AAR2Q9Y312 384 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 ANAPC1Q9H1A4 1944 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 IGLV3-10A0A075B6K4 115 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 A0A0D9SEW6 157 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CCL16O15467 120 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 UGT1A9O60656 530 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 LILRB3O75022 631 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 GLUD1P00367 558 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MYL4P12829 197 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 TSHRP16473 764 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CA4P22748 312 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SLC10A7Q0GE19 358 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 NR1H3Q13133 447 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 PABPC1LQ4VXU2 614 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 RABGAP1LQ5R372 815 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CERCAMQ5T4B2 595 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ARTNQ5T4W7 220 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 EMC10Q5UCC4 262 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SNX30Q5VWJ9 437 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms