RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PAGE5Q96GU1 130 aa14.34□□□□□ -0.11
SPCS3-204ENST00000513139 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
SPCS3-204ENST00000513139 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
SPCS3-204ENST00000513139 NUCKS1Q9H1E3 243 aaKnown RBP14.34□□□□□ -0.11
SPCS3-204ENST00000513139 SATB2Q9UPW6 733 aa14.34□□□□□ -0.11
SPCS3-204ENST00000513139 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
SPCS3-204ENST00000513139 TEX15Q9BXT5 2789 aa14.34□□□□□ -0.11
SPCS3-204ENST00000513139 LY6G6EA0A0G2JKS1 128 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 FAM237AA0A1B0GTK4 181 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 CDRT15L2A8MXV6 281 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 O00370 1275 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 SCAMP1O15126 338 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
SPCS3-204ENST00000513139 STX10O60499 249 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 VDRP11473 427 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 CD19P15391 556 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 VAV1P15498 845 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
SPCS3-204ENST00000513139 PLK1P53350 603 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
SPCS3-204ENST00000513139 CNTN1Q12860 1018 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 LCLAT1Q6UWP7 414 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 CCDC81Q6ZN84 652 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 PRICKLE2Q7Z3G6 844 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 MAPK15Q8TD08 544 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 SLC39A13Q96H72 371 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 FAM117AQ9C073 453 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 NCKIPSDQ9NZQ3 722 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 SARDHQ9UL12 918 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 PPM1HQ9ULR3 514 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 HEMK1Q9Y5R4 338 aaPredicted RBP14.33□□□□□ -0.12
SPCS3-204ENST00000513139 U3KQA8 63 aa14.33□□□□□ -0.12
SPCS3-204ENST00000513139 BSNQ9UPA5 3926 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 C1QTNF3-AMACRE9PGA6 284 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 MCF2LO15068 1137 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 FBXO21O94952 628 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 OXCT1P55809 520 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 HNRNPKP61978 463 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPCS3-204ENST00000513139 ADAM9Q13443 819 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 CUL2Q13617 745 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 ARL13BQ3SXY8 428 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 C3orf38Q5JPI3 329 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 PMF1Q6P1K2 205 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 DCP2Q8IU60 420 aaKnown RBP14.32□□□□□ -0.12
SPCS3-204ENST00000513139 LURAP1LQ8IV03 231 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 TPCN2Q8NHX9 752 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 IFI44Q8TCB0 444 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 EEF2KMTQ96G04 330 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 PRR11Q96HE9 360 aaPredicted RBP14.32□□□□□ -0.12
SPCS3-204ENST00000513139 OSBPL2Q9H1P3 480 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 CA5BQ9Y2D0 317 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 COQ4Q9Y3A0 265 aa14.32□□□□□ -0.12
SPCS3-204ENST00000513139 A0A1W2PNU3 283 aaPredicted RBP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 K7ESM1 405 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 TERTO14746 1132 aaKnown RBP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ATP9BO43861 1147 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 TGM2P21980 687 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 AKT2P31751 481 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 SYKP43405 635 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 TAS2R38P59533 333 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 CCDC15Q0P6D6 951 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 POM121L1PQ3SYA9 428 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ZCCHC8Q6NZY4 707 aaKnown RBP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ABI3BPQ7Z7G0 1075 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 CLEC14AQ86T13 490 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ARL14Q8N4G2 192 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 DQX1Q8TE96 717 aaKnown RBP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 HSFY1Q96LI6 401 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 GBP4Q96PP9 640 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 PPP1R9BQ96SB3 815 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPCS3-204ENST00000513139 USP25Q9UHP3 1055 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 ENTPD2Q9Y5L3 495 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 SCN8AQ9UQD0 1980 aa14.31□□□□□ -0.12
SPCS3-204ENST00000513139 SLC31A1O15431 190 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 TCEA3O75764 348 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 ZNF202O95125 648 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 NTRK1P04629 796 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 FYNP06241 537 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 PAEPP09466 180 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 HNRNPA2B1P22626 353 aaKnown RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 RGS7P49802 495 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 NFATC3Q12968 1075 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CNGA2Q16280 664 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 ZNF284Q2VY69 593 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 TTC39BQ5VTQ0 682 aaPredicted RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 BEND5Q7L4P6 421 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 HORMAD1Q86X24 394 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 FMR1NBQ8N0W7 255 aaPredicted RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 OR13H1Q8NG92 308 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CLEC4CQ8WTT0 213 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms