RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 SPRY3O43610 288 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 LCKP06239 509 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ITGA2BP08514 1039 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 PKMP14618 531 aaKnown RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 ARSBP15848 533 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 AVPR2P30518 371 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 SERPINF1P36955 418 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 STAT1P42224 750 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 PCYT1AP49585 367 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 PDCLQ13371 301 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 PUM3Q15397 648 aaKnown RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 DUSP6Q16828 381 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ATPAF1Q5TC12 328 aaPredicted RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 FAM171A1Q5VUB5 890 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 DCAF12L2Q5VW00 463 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 SYNE3Q6ZMZ3 975 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 TOGARAM2Q6ZUX3 1019 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 CADM3Q8N126 398 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ENDOVQ8N8Q3 282 aaKnown RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 CLEC18CQ8NCF0 446 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 STT3BQ8TCJ2 826 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 SLC2A12Q8TD20 617 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 NUDCD2Q8WVJ2 157 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 KCNJ9Q92806 393 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ARRDC3Q96B67 414 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 APOLD1Q96LR9 279 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 DCLK3Q9C098 648 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 HIPK3Q9H422 1215 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ACAD9Q9H845 621 aa3.54□□□□□ -1.84
VPS50-216ENST00000484954 ACTR5Q9H9F9 607 aaPredicted RBP3.54□□□□□ -1.84
VPS50-216ENST00000484954 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 C17orf100A8MU93 164 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 PRSS44E7EML9 344 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 STMND1H3BQB6 276 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 SETSIPP0DME0 302 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 HOXB9P17482 250 aaPredicted RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 PPP3CCP48454 512 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 CYP2J2P51589 502 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 AP2B1P63010 937 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 ROR2Q01974 943 aaKnown RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 TNFAIP2Q03169 654 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 CRYZQ08257 329 aaKnown RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 DCTN1Q14203 1278 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 HNF4GQ14541 408 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 PLK5Q496M5 336 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 FNBP1LQ5T0N5 605 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 PGBD2Q6P3X8 592 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 C18orf65Q6ZTR6 163 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 RAB11FIP2Q7L804 512 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 ZNF367Q7RTV3 350 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 TRIM74Q86UV6 250 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 SCN4BQ8IWT1 228 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 DCP1BQ8IZD4 617 aaKnown RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 HORMAD2Q8N7B1 307 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 ELP5Q8TE02 316 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 C3orf49Q96BT1 292 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 SLC39A13Q96H72 371 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 MED30Q96HR3 178 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 LMLNQ96KR4 655 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 RMDN3Q96TC7 470 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 HERC2P3Q9BVR0 1158 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 TRIM31Q9BZY9 425 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 CLPBQ9H078 707 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 RNF146Q9NTX7 359 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 ZDHHC7Q9NXF8 308 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 PLK2Q9NYY3 685 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 LRFN1Q9P244 771 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 HERC5Q9UII4 1024 aaKnown RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 SLC25A13Q9UJS0 675 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 C19orf53Q9UNZ5 99 aaPredicted RBP3.53□□□□□ -1.84
VPS50-216ENST00000484954 LRCH1Q9Y2L9 728 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 RAP2CQ9Y3L5 183 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
VPS50-216ENST00000484954 OR6C75A6NL08 312 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 EFCAB8A8MWE9 144 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 LDB2O43679 373 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 SKAP2O75563 359 aaPredicted RBP3.52□□□□□ -1.85
VPS50-216ENST00000484954 PAPSS2O95340 614 aaPredicted RBP3.52□□□□□ -1.85
VPS50-216ENST00000484954 UNGP13051 313 aaPredicted RBP3.52□□□□□ -1.85
VPS50-216ENST00000484954 ACP5P13686 325 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 ITGB8P26012 769 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 SERPINA4P29622 427 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 THPOP40225 353 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 CDK7P50613 346 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 DSCR9P59020 149 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 EGR4Q05215 589 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 KEAP1Q14145 624 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 RPS6KA2Q15349 733 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 ASIC2Q16515 512 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 ZNF284Q2VY69 593 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 TBRG1Q3YBR2 411 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 GXYLT1Q4G148 440 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 SYTL3Q4VX76 610 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 VWA5B1Q5TIE3 1220 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 DGAT2L7PQ6IED9 249 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 KLHL17Q6TDP4 642 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 IGFN1Q86VF2 1251 aa3.52□□□□□ -1.85
VPS50-216ENST00000484954 CCDC146Q8IYE0 955 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms