RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SP5Q6BEB4 398 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NCAPH2Q6IBW4 605 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CXorf57Q6NSI4 855 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 MEX3BQ6ZN04 569 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 C15orf52Q6ZUT6 534 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 LHFPL2Q6ZUX7 228 aa3□□□□□ -1.93
PMS1-209ENST00000424059 Q6ZVL8 140 aa3□□□□□ -1.93
PMS1-209ENST00000424059 USP50Q70EL3 339 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 GPR142Q7Z601 462 aa3□□□□□ -1.93
PMS1-209ENST00000424059 GATAD2AQ86YP4 633 aa3□□□□□ -1.93
PMS1-209ENST00000424059 P3H2Q8IVL5 708 aa3□□□□□ -1.93
PMS1-209ENST00000424059 GALNT15Q8N3T1 639 aa3□□□□□ -1.93
PMS1-209ENST00000424059 FITM2Q8N6M3 262 aa3□□□□□ -1.93
PMS1-209ENST00000424059 XXYLT1Q8NBI6 393 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CEP76Q8TAP6 659 aa3□□□□□ -1.93
PMS1-209ENST00000424059 LMBR1Q8WVP7 490 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RAPGEF5Q92565 580 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TMIGD2Q96BF3 282 aa3□□□□□ -1.93
PMS1-209ENST00000424059 FAM149B1Q96BN6 582 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ABHD8Q96I13 439 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PHACTR3Q96KR7 559 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NT5C1BQ96P26 610 aa3□□□□□ -1.93
PMS1-209ENST00000424059 YME1L1Q96TA2 773 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PRPF18Q99633 342 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CIB1Q99828 191 aa3□□□□□ -1.93
PMS1-209ENST00000424059 C19orf43Q9BQ61 176 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NTMT1Q9BV86 223 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NAA15Q9BXJ9 866 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 PUS3Q9BZE2 481 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CCSER1Q9C0I3 900 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NYXQ9GZU5 481 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HAUS4Q9H6D7 363 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MANSC1Q9H8J5 431 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NTN4Q9HB63 628 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SLC39A1Q9NY26 324 aa3□□□□□ -1.93
PMS1-209ENST00000424059 GGA3Q9NZ52 723 aa3□□□□□ -1.93
PMS1-209ENST00000424059 VPS18Q9P253 973 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MBD2Q9UBB5 411 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RASAL2Q9UJF2 1139 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ANAPC5Q9UJX4 755 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MTO1Q9Y2Z2 717 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 NEU2Q9Y3R4 380 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PCDHGA2Q9Y5H1 932 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RRN3P2A6NIE6 340 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TXNL1O43396 289 aa3□□□□□ -1.93
PMS1-209ENST00000424059 IDH3BO43837 385 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SMPD2O60906 423 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PIAS2O75928 621 aa3□□□□□ -1.93
PMS1-209ENST00000424059 C1QL1O75973 258 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MATN4O95460 622 aa3□□□□□ -1.93
PMS1-209ENST00000424059 EYA4O95677 639 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HLA-DRAP01903 254 aa3□□□□□ -1.93
PMS1-209ENST00000424059 POU2F1P14859 743 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HSPA6P17066 643 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ALOX12P18054 663 aa3□□□□□ -1.93
PMS1-209ENST00000424059 KELP23276 732 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ATP5F1P24539 256 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 SOX5P35711 763 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TRIM23P36406 574 aa3□□□□□ -1.93
PMS1-209ENST00000424059 FOLR3P41439 243 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MCAMP43121 646 aa3□□□□□ -1.93
PMS1-209ENST00000424059 GRK6P43250 576 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ALDH3A2P51648 485 aa3□□□□□ -1.93
PMS1-209ENST00000424059 VBP1P61758 197 aa3□□□□□ -1.93
PMS1-209ENST00000424059 OTUD4Q01804 1114 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 SLC14A1Q13336 389 aa3□□□□□ -1.93
PMS1-209ENST00000424059 DYNC1I2Q13409 638 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CYLC2Q14093 348 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 DOC2AQ14183 400 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CCDC40Q4G0X9 1142 aa3□□□□□ -1.93
PMS1-209ENST00000424059 XKR3Q5GH77 459 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RBM20Q5T481 1227 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 STXBP5Q5T5C0 1151 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SIGIRRQ6IA17 410 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RPUSD3Q6P087 351 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 TMEM154Q6P9G4 183 aa3□□□□□ -1.93
PMS1-209ENST00000424059 AAGABQ6PD74 315 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ZYG11AQ6WRX3 759 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RGS9BPQ6ZS82 235 aa3□□□□□ -1.93
PMS1-209ENST00000424059 KRT27Q7Z3Y8 459 aa3□□□□□ -1.93
PMS1-209ENST00000424059 KCNK18Q7Z418 384 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ZBTB46Q86UZ6 589 aa3□□□□□ -1.93
PMS1-209ENST00000424059 KRT73Q86Y46 540 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ERO1BQ86YB8 467 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SLC22A9Q8IVM8 553 aa3□□□□□ -1.93
PMS1-209ENST00000424059 C12orf56Q8IXR9 622 aa3□□□□□ -1.93
PMS1-209ENST00000424059 FAM186BQ8IYM0 893 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NEK11Q8NG66 645 aa3□□□□□ -1.93
PMS1-209ENST00000424059 OR6S1Q8NH40 331 aa3□□□□□ -1.93
PMS1-209ENST00000424059 IRGQQ8WZA9 623 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SMG7Q92540 1137 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 ZKSCAN4Q969J2 545 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 LRRC59Q96AG4 307 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 SPDL1Q96EA4 605 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MTMR8Q96EF0 704 aa3□□□□□ -1.93
PMS1-209ENST00000424059 RPGRIP1Q96KN7 1286 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ART5Q96L15 291 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NLRP4Q96MN2 994 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TBCBQ99426 244 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms