RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PARM1Q6UWI2 310 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 CYP4V2Q6ZWL3 525 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 SIX6OS1Q8N1H7 587 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 OR10T2Q8NGX3 314 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PCDH19Q8TAB3 1148 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF398Q8TD17 642 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PAFAH2Q99487 392 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 NAT9Q9BTE0 207 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 BRD8Q9H0E9 1235 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 SAE1Q9UBE0 346 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF180Q9UJW8 692 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ANKRD65E5RJM6 399 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PIK3R2O00459 728 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PPP1R12AO14974 1030 aaPredicted RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 NCAM2O15394 837 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 HCRTO43612 131 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 DCTN3O75935 186 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM155BO75949 473 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM200BP0CF97 657 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 MLNP12872 115 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 CPB1P15086 417 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 IL4RP24394 825 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 CNTFP26441 200 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 GCAP28676 217 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ELK3P41970 407 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 SCTRP47872 440 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 SULT1E1P49888 294 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 YWHAZP63104 245 aaKnown RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TSPY1Q01534 308 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 COL9A2Q14055 689 aaPredicted RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 RAB33AQ14088 237 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PDK1Q15118 436 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PPP6R3Q5H9R7 873 aaPredicted RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TTC39BQ5VTQ0 682 aaPredicted RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ANKRD22Q5VYY1 191 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TRNP1Q6NT89 227 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 NPNTQ6UXI9 565 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 CYS1Q717R9 158 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC26A11Q86WA9 606 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 DENND1AQ8TEH3 1009 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TFB1MQ8WVM0 346 aaKnown RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 FGF14Q92915 247 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 QKIQ96PU8 341 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 PAIP2Q9BPZ3 127 aaKnown RBP13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TUBB6Q9BUF5 446 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 VPS11Q9H270 941 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 FGFR1OP2Q9NVK5 253 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 FZD10Q9ULW2 581 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 TEX264Q9Y6I9 313 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
SMARCB1-203ENST00000407082 ATRXP46100 2492 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 AP3B1O00203 1094 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 MTSS1O43312 755 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 TGM5O43548 720 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 ATP2C2O75185 946 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 KRT38O76015 456 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 TROVE2P10155 538 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 CCDC130P13994 396 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 TAC1P20366 129 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 RBL1P28749 1068 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SSTR1P30872 391 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SKIV2L2P42285 1042 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 DMWDQ09019 674 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 GPR17Q13304 367 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 NAB1Q13506 487 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 FASTKD3Q14CZ7 662 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 INTS6LQ5JSJ4 861 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SPDYAQ5MJ70 313 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF461Q8TAF7 563 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 IQCGQ9H095 443 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 POPDC2Q9HBU9 364 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 CNGB3Q9NQW8 809 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms