RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CHST15Q7LFX5 561 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 LDB1Q86U70 411 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 DPEP3Q9H4B8 488 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 A0A0G2JLL6 359 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 SOCS7O14512 581 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 MAGEB2O15479 319 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 HUS1O60921 280 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 C22orf31O95567 290 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 C2P06681 752 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 HMBSP08397 361 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 EPHX2P34913 555 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ZNF132P52740 706 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 MAPK11Q15759 364 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 LRRC38Q5VT99 294 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 ILDR2Q71H61 639 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 PDZD4Q76G19 769 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 PLD6Q8N2A8 252 aaKnown RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 GABPB2Q8TAK5 448 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-202ENST00000394820 HAUS8Q9BT25 410 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 FAM192AQ9GZU8 254 aa13.46□□□□□ -0.25
NFKB1-202ENST00000394820 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 B4GALT4O60513 344 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 VDRP11473 427 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 PCNAP12004 261 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 GP5P40197 560 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 LSM3P62310 102 aaKnown RBP13.46□□□□□ -0.26
NFKB1-202ENST00000394820 LAMC2Q13753 1193 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 C6orf10Q5SRN2 563 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 TWF2Q6IBS0 349 aaKnown RBP13.46□□□□□ -0.26
NFKB1-202ENST00000394820 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 SCN4BQ8IWT1 228 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 DSELQ8IZU8 1212 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 NXF3Q9H4D5 531 aaKnown RBP13.46□□□□□ -0.26
NFKB1-202ENST00000394820 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.26
NFKB1-202ENST00000394820 LAMA2P24043 3122 aaKnown RBP13.46□□□□□ -0.26
NFKB1-202ENST00000394820 MYL3P08590 195 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 GFAPP14136 432 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 MAP3K7CLP57077 242 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 SNAPC2Q13487 334 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 GPR162Q16538 588 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ARL13AQ5H913 290 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 NOL9Q5SY16 702 aaKnown RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 FAM47BQ8NA70 645 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 NR1H4Q96RI1 486 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ARMC7Q9H6L4 198 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 PPP2R3BQ9Y5P8 575 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 INPP4BO15327 924 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 PLIN3O60664 434 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CILPO75339 1184 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 BAIAP3O94812 1187 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CTSHP09668 335 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ARSAP15289 507 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 EDNRBP24530 442 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 MRPS5P82675 430 aaKnown RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 KRT72Q14CN4 511 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 TNFAIP8L3Q5GJ75 292 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 FBXW8Q8N3Y1 598 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 TSPAN14Q8NG11 270 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 P2RY11Q96G91 374 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 RPL10LQ96L21 214 aaKnown RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 TEX264Q9Y6I9 313 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CHADO15335 359 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 MAN1A2O60476 641 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 MAGEC1O60732 1142 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 RFPL1O75677 317 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 BEX3Q00994 111 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 GPR107Q5VW38 600 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ADGRF2Q8IZF7 708 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 MIER2Q8N344 545 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 LRTOMTQ8WZ04 291 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CERS2Q96G23 380 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 TBCBQ99426 244 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 GATA5Q9BWX5 397 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-202ENST00000394820 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 CPA4Q9UI42 421 aa13.45□□□□□ -0.26
NFKB1-202ENST00000394820 PDLIM1O00151 329 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CXCL11O14625 94 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms