RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 USP13Q92995 863 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 MAELQ96JY0 434 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 KLC2Q9H0B6 622 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PDZD7Q9H5P4 517 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 SEPT10Q9P0V9 454 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PAK5Q9P286 719 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 DAPK2Q9UIK4 370 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CDC14AQ9UNH5 594 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 TTLL3Q9Y4R7 772 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CEP350Q5VT06 3117 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 A0A1W2PPW3 197 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PSMD11O00231 422 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 AIM2O14862 343 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 KRT37O76014 449 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 IDO1P14902 403 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 IL4RP24394 825 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ETV4P43268 484 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PKNOX1P55347 436 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CDKL1Q00532 357 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 MAPK11Q15759 364 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CCDC153Q494R4 210 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 DCDC5Q6ZRR9 648 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CAND1Q86VP6 1230 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 PEX5LQ8IYB4 626 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMG6-202ENST00000354901 PLEKHA8Q96JA3 519 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 NEURL2Q9BR09 285 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 AASDHPPTQ9NRN7 309 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PRMT7Q9NVM4 692 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 RNF181Q9P0P0 153 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 POU2F3Q9UKI9 436 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 GIT1Q9Y2X7 761 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 SCN4AP35499 1836 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 GOLGA8TH3BQL2 631 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 KRT75O95678 551 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 APOEP02649 317 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 SNRPAP09012 282 aaKnown RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 PSMC3P17980 439 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 S100A1P23297 94 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 CYP2F1P24903 491 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 SESN2P58004 480 aaPredicted RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 PFKPQ01813 784 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 NME3Q13232 169 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 LRP8Q14114 963 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 KRT72Q14CN4 511 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 TAZQ16635 292 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 ZNF423Q2M1K9 1284 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 KIZQ2M2Z5 673 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 TTC39BQ5VTQ0 682 aaPredicted RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 GPR107Q5VW38 600 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 HEATR4Q86WZ0 1026 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 ERI1Q8IV48 349 aaKnown RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 NUDCD3Q8IVD9 361 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 PYROXD2Q8N2H3 581 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 HERC2P3Q9BVR0 1158 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 WWP1Q9H0M0 922 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 RBM38Q9H0Z9 239 aaKnown RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 POPDC2Q9HBU9 364 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 HESX1Q9UBX0 185 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 DDNO94850 711 aaPredicted RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 PFKMP08237 780 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 PPARGP37231 505 aaPredicted RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 COPAP53621 1224 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 HNRNPDQ14103 355 aaKnown RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
SMG6-202ENST00000354901 CES3Q6UWW8 571 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 UNC5AQ6ZN44 842 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 DEPDC1BQ8WUY9 529 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 AFG1LQ8WV93 481 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 GBA3Q9H227 469 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 DPEP3Q9H4B8 488 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 TMPRSS4Q9NRS4 437 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 ERAP1Q9NZ08 941 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 POMPQ9Y244 141 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 SCN1AP35498 2009 aa9.56□□□□□ -0.88
SMG6-202ENST00000354901 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 BIRC5O15392 142 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 LYPLA1O75608 230 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 C22orf31O95567 290 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CYP2C9P11712 490 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 HMOX2P30519 316 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 NUP107P57740 925 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ESRRGP62508 458 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 TRAF2Q12933 501 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 FAM47CQ5HY64 1035 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CES4AQ5XG92 561 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ELMSAN1Q6PJG2 1045 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 KCNT2Q6UVM3 1135 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PLPPR4Q7Z2D5 763 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 FAM131BQ86XD5 332 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CRLF3Q8IUI8 442 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PQLC1Q8N2U9 271 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms