RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PIGWQ7Z7B1 504 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 LGMNQ99538 433 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 USP29Q9HBJ7 922 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 SAMD15Q9P1V8 674 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ARHGAP26Q9UNA1 814 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 PRRC2BQ5JSZ5 2229 aaKnown RBP22.55■■□□□ 1.2
HOXC8-201ENST00000040584 LEFTY2O00292 366 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 IFNB1P01574 187 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 RHOQP17081 205 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 RBL1P28749 1068 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 SERPINB6P35237 376 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 VPS41P49754 854 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 NRLP54845 237 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 SLC45A4Q5BKX6 768 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 Q6ZNB5 142 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 QKIQ96PU8 341 aaKnown RBP eCLIP22.55■■□□□ 1.2
HOXC8-201ENST00000040584 PCDH9Q9HC56 1237 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 SH3BP1Q9Y3L3 701 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 RAD54BQ9Y620 910 aa22.55■■□□□ 1.2
HOXC8-201ENST00000040584 A0A1W2PPC1 479 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 SMIM23A6NLE4 172 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 WASH4PA8MWX3 477 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 SYCE2Q6PIF2 218 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 SH3RF2Q8TEC5 729 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 USP13Q92995 863 aaPredicted RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 RTP4Q96DX8 246 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 PRICKLE1Q96MT3 831 aaPredicted RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 STOML2Q9UJZ1 356 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 LSM7Q9UK45 103 aaKnown RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 NUP205Q92621 2012 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 CFAP69A5D8W1 941 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 HACD1B0YJ81 288 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 KCNN4O15554 427 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 TSPAN3O60637 253 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 SGSHP51688 502 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 STAT4Q14765 748 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 PDK1Q15118 436 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 ANKRD54Q6NXT1 300 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 EXOC3L1Q86VI1 746 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 CDKL3Q8IVW4 592 aaPredicted RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 CCNYQ8ND76 341 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 TFB1MQ8WVM0 346 aaKnown RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 TMEM248Q9NWD8 314 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 ACTL7BQ9Y614 415 aa22.54■■□□□ 1.2
HOXC8-201ENST00000040584 ZFP37Q9Y6Q3 630 aaPredicted RBP22.54■■□□□ 1.2
HOXC8-201ENST00000040584 C2orf16Q68DN1 1984 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 DOCK4Q8N1I0 1966 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 SOBPA7XYQ1 873 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 LATS1O95835 1130 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 RPS24P62847 133 aaKnown RBP22.53■■□□□ 1.2
HOXC8-201ENST00000040584 C5orf22Q49AR2 442 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 HTR3DQ70Z44 454 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 GPR149Q86SP6 731 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 ARHGAP12Q8IWW6 846 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 RIBC1Q8N443 379 aaPredicted RBP22.53■■□□□ 1.2
HOXC8-201ENST00000040584 ARHGEF2Q92974 986 aaKnown RBP22.53■■□□□ 1.2
HOXC8-201ENST00000040584 TDP1Q9NUW8 608 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 LMCD1Q9NZU5 365 aa22.53■■□□□ 1.2
HOXC8-201ENST00000040584 PPP1R12AO14974 1030 aaPredicted RBP22.52■■□□□ 1.2
HOXC8-201ENST00000040584 PRAMEF12O95522 483 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 VAV1P15498 845 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 HNRNPH1P31943 449 aaKnown RBP22.52■■□□□ 1.2
HOXC8-201ENST00000040584 GALNT2Q10471 571 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 AP1B1Q10567 949 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 ADAM15Q13444 863 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 PRKD1Q15139 912 aaPredicted RBP22.52■■□□□ 1.2
HOXC8-201ENST00000040584 BBS7Q8IWZ6 715 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 CCDC13Q8IYE1 715 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 LZTR1Q8N653 840 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 RIN3Q8TB24 985 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 DEPDC1BQ8WUY9 529 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 DDX50Q9BQ39 737 aaKnown RBP22.52■■□□□ 1.2
HOXC8-201ENST00000040584 SLC39A8Q9C0K1 460 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 ZNF212Q9UDV6 495 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 LGALS13Q9UHV8 139 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 MTCH2Q9Y6C9 303 aa22.52■■□□□ 1.2
HOXC8-201ENST00000040584 DFFAO00273 331 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 NCAM2O15394 837 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 ACSL3O95573 720 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 ABHD2P08910 425 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 SLCO1A2P46721 670 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 RABGAP1LQ5R372 815 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 UHMK1Q8TAS1 419 aaKnown RBP22.51■■□□□ 1.19
HOXC8-201ENST00000040584 CCT6BQ92526 530 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 NOL6Q9H6R4 1146 aaKnown RBP22.51■■□□□ 1.19
HOXC8-201ENST00000040584 CCT8L1PA6NM43 557 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 CDH16O75309 829 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 MX2P20592 715 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 GARSP41250 739 aaKnown RBP22.51■■□□□ 1.19
HOXC8-201ENST00000040584 NR1H3Q13133 447 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 HEATR6Q6AI08 1181 aaKnown RBP22.51■■□□□ 1.19
HOXC8-201ENST00000040584 ARID3BQ8IVW6 561 aaPredicted RBP22.51■■□□□ 1.19
HOXC8-201ENST00000040584 TTC25Q96NG3 672 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 PLCD4Q9BRC7 762 aa22.51■■□□□ 1.19
HOXC8-201ENST00000040584 HELZP42694 1942 aaKnown RBP22.5■■□□□ 1.19
HOXC8-201ENST00000040584 GSTA1P08263 222 aa22.5■■□□□ 1.19
HOXC8-201ENST00000040584 FSHRP23945 695 aa22.5■■□□□ 1.19
HOXC8-201ENST00000040584 OR1E1P30953 314 aa22.5■■□□□ 1.19
HOXC8-201ENST00000040584 RPL22P35268 128 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms