RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
LITAF-221ENST00000622633 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 GPD2P43304 727 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
LITAF-221ENST00000622633 NR1H2P55055 460 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 C21orf59P57076 290 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 XIAPP98170 497 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
LITAF-221ENST00000622633 JADE1Q6IE81 842 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 ZNF398Q8TD17 642 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 SLC44A1Q8WWI5 657 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 SHCBP1LQ9BZQ2 653 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 ZNF696Q9H7X3 374 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 FBXO6Q9NRD1 293 aaPredicted RBP12.72□□□□□ -0.37
LITAF-221ENST00000622633 RAB6BQ9NRW1 208 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 ENPP3O14638 875 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 CILPO75339 1184 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 P4HA1P13674 534 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 KCNJ11Q14654 390 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 NOMO1Q15155 1222 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 USP41Q3LFD5 358 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 ITPRIPL1Q6GPH6 555 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 EFCAB12Q6NXP0 572 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 SH2D5Q6ZV89 423 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 DHDDSQ86SQ9 333 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 SLC51BQ86UW2 128 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 RIOX2Q8IUF8 465 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 TOR1AIP2Q8NFQ8 470 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 RXFP2Q8WXD0 754 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
LITAF-221ENST00000622633 RANBP9Q96S59 729 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 PPP1R16BQ96T49 567 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 MARCH7Q9H992 704 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 C12orf10Q9HB07 376 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 KCNK13Q9HB14 408 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 GPAMQ9HCL2 828 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 GPATCH2LQ9NWQ4 482 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 CLOCKO15516 846 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 MAGEC1O60732 1142 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 PGK2P07205 417 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 DHRS4L1P0CG22 281 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 RARBP10826 455 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 TSHRP16473 764 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 CTRB1P17538 263 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ETV4P43268 484 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 GABRB2P47870 512 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ZNF143P52747 638 aaPredicted RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 MYBPC1Q00872 1141 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 CHRNEQ04844 493 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ZBTB16Q05516 673 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 CTRB2Q6GPI1 263 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 RWDD4Q6NW29 188 aaKnown RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 HPS1Q92902 700 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 BTBD9Q96Q07 612 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 TUBB6Q9BUF5 446 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 KLC2Q9H0B6 622 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 C12orf4Q9NQ89 552 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 GGA3Q9NZ52 723 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 KCNN4O15554 427 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 IL18RAPO95256 599 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 GPD1P21695 349 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 PEX2P28328 305 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 PMLP29590 882 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ZNF135P52742 658 aaPredicted RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 IST1P53990 364 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 SLC18A2Q05940 514 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 SCYL2Q6P3W7 929 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 CADM3Q8N126 398 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 PPM1NQ8N819 430 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 Q8N9G6 341 aaPredicted RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.37
LITAF-221ENST00000622633 ATL1Q8WXF7 558 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 COPS5Q92905 334 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 APOPT1Q96IL0 206 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 CNPY3Q9BT09 278 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 TMEM120AQ9BXJ8 343 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 ADAMTS6Q9UKP5 1117 aa12.71□□□□□ -0.37
LITAF-221ENST00000622633 CXorf49A8MYA2 514 aaPredicted RBP12.7□□□□□ -0.38
LITAF-221ENST00000622633 CENPBD1B2RD01 187 aa12.7□□□□□ -0.38
LITAF-221ENST00000622633 E5RJQ4 531 aa12.7□□□□□ -0.38
LITAF-221ENST00000622633 SOCS7O14512 581 aa12.7□□□□□ -0.38
LITAF-221ENST00000622633 RGS13O14921 159 aa12.7□□□□□ -0.38
LITAF-221ENST00000622633 DENRO43583 198 aaKnown RBP12.7□□□□□ -0.38
LITAF-221ENST00000622633 SIN3BO75182 1162 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms