RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ZYG11BQ9C0D3 744 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ROPN1Q9HAT0 212 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TMBIM4Q9HC24 238 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 VANGL2Q9ULK5 521 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 LINC01553A4QN01 128 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 GOLGA6CA6NDK9 693 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 DRGXA6NNA5 263 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 E7ESA3 106 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 E7EVH7 732 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 C5orf67F2Z3F1 127 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 OAS1P00973 400 aaKnown RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 F11P03951 625 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SHBGP04278 402 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 RB1P06400 928 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 APRTP07741 180 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ABHD2P08910 425 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 GOLGA6DP0CG33 693 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 TIMP2P16035 220 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CCNCP24863 283 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SLC11A2P49281 568 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 HARS2P49590 506 aaKnown RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 KCNQ1P51787 676 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ERVFC1P60507 584 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CDK16Q00536 496 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 GAD2Q05329 585 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SEMA5AQ13591 1074 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 KRT71Q3SY84 523 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 TTMPQ5BVD1 217 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 FNBP1LQ5T0N5 605 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 FAXCQ5TGI0 409 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 AFMIDQ63HM1 303 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 RAP1GAP2Q684P5 730 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 FBXL22Q6P050 247 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 PID1Q7Z2X4 250 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 NLRP14Q86W24 1093 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ARHGAP12Q8IWW6 846 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CCDC13Q8IYE1 715 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ZBED8Q8IZ13 594 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ZNF567Q8N184 647 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 UMODL1-AS1Q8N2C9 162 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 MRPL43Q8N983 215 aaKnown RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SPPL3Q8TCT6 385 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 DPF3Q92784 378 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 AZIN2Q96A70 460 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CELF6Q96J87 481 aaKnown RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ATP6V1G3Q96LB4 118 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 C9orf72Q96LT7 481 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 PRMT1Q99873 361 aaKnown RBP9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CCDC77Q9BR77 488 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 RETREG1Q9H6L5 497 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ENTPD7Q9NQZ7 604 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 TLR9Q9NR96 1032 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 TMEM248Q9NWD8 314 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 GOLGA6AQ9NYA3 693 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 MPP6Q9NZW5 540 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SEPT10Q9P0V9 454 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 VPS18Q9P253 973 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 IGSF9Q9P2J2 1179 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 TRHDEQ9UKU6 1024 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 NR2E3Q9Y5X4 410 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 CLUHO75153 1309 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 ANAPC1Q9H1A4 1944 aa9.13□□□□□ -0.95
CCDC47-207ENST00000612558 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 MYO7AQ13402 2215 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C2orf71A6NGG8 1288 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 KCNK1O00180 336 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 DFFAO00273 331 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 MAN1A2O60476 641 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ACSL4O60488 711 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 MAFKO60675 156 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TCEA3O75764 348 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 GLUD1P00367 558 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 LRG1P02750 347 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TACR2P21452 398 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 PTPN3P26045 913 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 CTHP32929 405 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 NDST2P52849 883 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 SARNPP82979 210 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C5orf22Q49AR2 442 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TEX44Q53QW1 395 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 FAM182AQ5T1J6 154 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 UBAP2Q5T6F2 1119 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 AGBL2Q5U5Z8 902 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ITPRIPL1Q6GPH6 555 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TIGD7Q6NT04 549 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 RTL10Q7L3V2 364 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 TMEM150AQ86TG1 271 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 ATPAF2Q8N5M1 289 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 KREMEN2Q8NCW0 462 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 UHMK1Q8TAS1 419 aaKnown RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 IGSF8Q969P0 613 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-207ENST00000612558 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
CCDC47-207ENST00000612558 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms