RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 HES3Q5TGS1 186 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 DEFB106AQ8N104 65 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 FCRL2Q96LA5 508 aaPredicted RBP19.86■□□□□ 0.77
SGMS1-208ENST00000608287 LGMNQ99538 433 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 C6orf106Q9H6K1 298 aaPredicted RBP19.86■□□□□ 0.77
SGMS1-208ENST00000608287 SGK2Q9HBY8 427 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 ASNSD1Q9NWL6 643 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 ELOVL2Q9NXB9 296 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 STOML2Q9UJZ1 356 aa19.86■□□□□ 0.77
SGMS1-208ENST00000608287 GOLGA6L7A0A1B0GV03 622 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ACSL4O60488 711 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 HSF2BPO75031 334 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 GRAP2O75791 330 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 TRUB2O95900 331 aaKnown RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ITGAVP06756 1048 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 CDH5P33151 784 aaPredicted RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ZNF445P59923 1031 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 RACK1P63244 317 aaKnown RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 SLC6A3Q01959 620 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 SFSWAPQ12872 951 aaKnown RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 NNTQ13423 1086 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 OLFML1Q6UWY5 402 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ERICH1Q86X53 443 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ZNF248Q8NDW4 579 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 TMA16Q96EY4 203 aaKnown RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 ELF4Q99607 663 aaPredicted RBP19.85■□□□□ 0.77
SGMS1-208ENST00000608287 SLC2A11Q9BYW1 496 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 CIPCQ9C0C6 399 aa19.85■□□□□ 0.77
SGMS1-208ENST00000608287 VILLO15195 856 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 IRAK2O43187 625 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 LSM8O95777 96 aaKnown RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 MOCS2O96007 188 aaPredicted RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 DNTTP04053 509 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 ARRB1P49407 418 aaPredicted RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 PITX1P78337 314 aaPredicted RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 CDK17Q00537 523 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 GEN1Q17RS7 908 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 TBC1D25Q3MII6 688 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 FILIP1LQ4L180 1135 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 RFWD3Q6PCD5 774 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 ZNF677Q86XU0 584 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 CACUL1Q86Y37 369 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 ZDHHC17Q8IUH5 632 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 SPACA3Q8IXA5 215 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 SLC20A1Q8WUM9 679 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 AZIN2Q96A70 460 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 BIRC7Q96CA5 298 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 SLC39A13Q96H72 371 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 SLC2A13Q96QE2 648 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 FAM204AQ9H8W3 233 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 NOCTQ9UK39 431 aaKnown RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 CLEC4EQ9ULY5 219 aa19.84■□□□□ 0.77
SGMS1-208ENST00000608287 TP53BP1Q12888 1972 aaPredicted RBP19.84■□□□□ 0.77
SGMS1-208ENST00000608287 SYNJ2BP-COX16A0A087WUM0 186 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 B8ZZF3 427 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 TEX33O43247 280 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 BRINP1O60477 761 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 FSBPO95073 299 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 APOEP02649 317 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 C7P10643 843 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 HOXD9P28356 352 aaPredicted RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 ACSL1P33121 698 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 ACADVLP49748 655 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 CDR2Q01850 454 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 CCDC173Q0VFZ6 552 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 CAMK2GQ13555 558 aaPredicted RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 IQCB1Q15051 598 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 FAM133BQ5BKY9 247 aaKnown RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 ZC3H12AQ5D1E8 599 aaKnown RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 NAA35Q5VZE5 725 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 FBXL19Q6PCT2 694 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 SLC26A9Q7LBE3 791 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 MSANTD4Q8NCY6 345 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 CPA5Q8WXQ8 436 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 C18orf8Q96DM3 657 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 DDX50Q9BQ39 737 aaKnown RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 RTN4Q9NQC3 1192 aaKnown RBP19.83■□□□□ 0.77
SGMS1-208ENST00000608287 COX16Q9P0S2 106 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 PLA2G4CQ9UP65 541 aa19.83■□□□□ 0.77
SGMS1-208ENST00000608287 MYLKQ15746 1914 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 DAB1O75553 588 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 IGLV3-25P01717 112 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 PRKCHP24723 683 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 SLC6A4P31645 630 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 GABRB2P47870 512 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 SGSHP51688 502 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 PCBP4P57723 403 aaKnown RBP19.82■□□□□ 0.76
SGMS1-208ENST00000608287 RNASE9P60153 205 aaKnown RBP19.82■□□□□ 0.76
SGMS1-208ENST00000608287 NOMO3P69849 1222 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 IL9RQ01113 521 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 SKOR2Q2VWA4 1001 aaPredicted RBP19.82■□□□□ 0.76
SGMS1-208ENST00000608287 C2CD6Q53TS8 623 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 PIK3R6Q5UE93 754 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 NADSYN1Q6IA69 706 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 OXR1Q8N573 874 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 RNF34Q969K3 372 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 CBX8Q9HC52 389 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 DDIT4Q9NX09 232 aa19.82■□□□□ 0.76
SGMS1-208ENST00000608287 TPX2Q9ULW0 747 aaKnown RBP19.82■□□□□ 0.76
SGMS1-208ENST00000608287 SCML1Q9UN30 329 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms