RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 BMPR2Q13873 1038 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 HM13Q8TCT9 377 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 CDH19Q9H159 772 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 SEMA6AQ9H2E6 1030 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 KLHL3Q9UH77 587 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 XPO7Q9UIA9 1087 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 DAPK2Q9UIK4 370 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 ADGRA2Q96PE1 1338 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 PLOD2O00469 737 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 ZC3H11AO75152 810 aaKnown RBP eCLIP14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 KRT1P04264 644 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 TCF4P15884 667 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 OSBPP22059 807 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 IDH3AP50213 366 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 NUDT2P50583 147 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 GDF10P55107 478 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 FAM182AQ5T1J6 154 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 SLFN12LQ6IEE8 588 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 ANKRD26P1Q6NSI1 321 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 MAVSQ7Z434 540 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 POLNQ7Z5Q5 900 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM192Q8IY95 271 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 CADM3Q8N126 398 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM102Q8N9M5 508 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 SERPINI1Q99574 410 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 OLFM1Q99784 485 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 ERVK-11Q9UQG0 969 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 A0A0G2JMZ2 1700 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 PRSS51A0A1B0GVH4 220 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 RNASEH2AO75792 299 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 KRT37O76014 449 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 TOP3BO95985 862 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 PRKCBP05771 671 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 SNRPAP09012 282 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 IQCF3P0C7M6 154 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 CLDN10P78369 228 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 CUL2Q13617 745 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 EFCAB12Q6NXP0 572 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 SCARA5Q6ZMJ2 495 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 USP50Q70EL3 339 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC26A11Q86WA9 606 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 TRUB1Q8WWH5 349 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 ACSF2Q96CM8 615 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 CDRT15Q96T59 188 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 C11orf70Q9BRQ4 267 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 OSBPL11Q9BXB4 747 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 C1orf232A0A0U1RR37 186 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 KPNA4O00629 521 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 CLASP2O75122 1294 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 ITGAVP06756 1048 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 PTPN2P17706 415 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 PKNOX1P55347 436 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 TFAMQ00059 246 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 MS4A2Q01362 244 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 TIGD2Q4W5G0 525 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 ARMCX2Q7L311 632 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 ZNF597Q96LX8 424 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 KAT6AQ92794 2004 aa14.31□□□□□ -0.12
GTF3C1-203ENST00000562609 A0A087WXM4 84 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 MGEA5O60502 916 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 CAPNS1P04632 268 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 MCF2P10911 925 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 HSPA8P11142 646 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 UNGP13051 313 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 ACO1P21399 889 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 MCCD1P59942 119 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 MYL6P60660 151 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 PRAMEP78395 509 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM26Q6ZUK4 368 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 RCOR2Q8IZ40 523 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 NDUFAF2Q8N183 169 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 FAM47BQ8NA70 645 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 RTKNQ9BST9 563 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 HERC2P3Q9BVR0 1158 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 NAA50Q9GZZ1 169 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 STN1Q9H668 368 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 PNPOQ9NVS9 261 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 AP4S1Q9Y587 144 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 NOTOA8MTQ0 251 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 RFPL1O75677 317 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 PIGRP01833 764 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 EIF2S1P05198 315 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 ZNF286BP0CG31 522 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 CD1EP15812 388 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 ZNF182P17025 639 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 FGFR3P22607 806 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 NR4A1P22736 598 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 GNA15P30679 374 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 TRAF2Q12933 501 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 IKBKEQ14164 716 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 FASTKD1Q53R41 847 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 PPP2R2DQ66LE6 453 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms