RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ALOX12P18054 663 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 APOBEC3AP31941 199 aaPredicted RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 SERPINF1P36955 418 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 IL12RB1P42701 662 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 PPP3CAQ08209 521 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 STIM1Q13586 685 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 PDIA5Q14554 519 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 SLC35G1Q2M3R5 365 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 RRAGBQ5VZM2 374 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 DRICH1Q6PGQ1 229 aaPredicted RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 MOXD1Q6UVY6 613 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 C11orf57Q6ZUT1 292 aaPredicted RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 KDELC2Q7Z4H8 507 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 GALNTL5Q7Z4T8 443 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 MRGPREQ86SM8 312 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 FAM160B2Q86V87 743 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 ADGRF4Q8IZF3 695 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 REPS2Q8NFH8 660 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 RASSF8Q8NHQ8 419 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 SPATA20Q8TB22 786 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 CPT1CQ8TCG5 803 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 ADAMTS15Q8TE58 950 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 TBCKQ8TEA7 893 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 DPF2Q92785 391 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 HOXB13Q92826 284 aaPredicted RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 FATE1Q969F0 183 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 CALML4Q96GE6 196 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 PRMT6Q96LA8 375 aaPredicted RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 DESI2Q9BSY9 194 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 CNPPD1Q9BV87 410 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 STK33Q9BYT3 514 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 ZNF768Q9H5H4 540 aaKnown RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 ZWILCHQ9H900 591 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 OBP2BQ9NPH6 170 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 SIPA1L1O43166 1804 aa5.46□□□□□ -1.53
SRP54-211ENST00000556445 C17orf113A0A1B0GUU1 675 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 TBKBP1A7MCY6 615 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 LGALS16A8MUM7 142 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 PRR5-ARHGAP8B1AHC4 643 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 TCP10L2B9ZVM9 353 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 F5H6K3 240 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 LEFTY2O00292 366 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 APOL1O14791 398 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 AKR1B10O60218 316 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 SCAF4O95104 1147 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 SGPL1O95470 568 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 GH2P01242 217 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ADRB2P07550 413 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ASNSP08243 561 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 KRT4P19013 534 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ADSLP30566 484 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 ATP6V1E1P36543 226 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 STAT6P42226 847 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 STAT2P52630 851 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 CXCL9Q07325 125 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 KLRC3Q07444 240 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DPTQ07507 201 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 SPAG1Q07617 926 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 IKQ13123 557 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 PNOCQ13519 176 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DAG1Q14118 895 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 KCNB1Q14721 858 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 BMT2Q1RMZ1 405 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 LETM2Q2VYF4 491 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DPCR1Q3MIW9 517 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 EARS2Q5JPH6 523 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 HAUS3Q68CZ6 603 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 RPUSD3Q6P087 351 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 MOGAT3Q86VF5 341 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DHX40Q8IX18 779 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 CCDC33Q8N5R6 958 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 C4orf32Q8N8J7 132 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 CCDC150Q8NCX0 1101 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ANKRD20A12PQ8NF67 263 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 OR7D4Q8NG98 312 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 MGARPQ8TDB4 240 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DHX58Q96C10 678 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 PAGE5Q96GU1 130 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ZBED3Q96IU2 234 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 CTAGE1Q96RT6 745 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 NCAPGQ9BPX3 1015 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ACE2Q9BYF1 805 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 UNKQ9C0B0 810 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 ARHGAP39Q9C0H5 1083 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 DNAJC18Q9H819 358 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 PSTPIP2Q9H939 334 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 BCO1Q9HAY6 547 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 VEZTQ9HBM0 779 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 PREBQ9HCU5 417 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 WDR35Q9P2L0 1181 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 EIF2B4Q9UI10 523 aaKnown RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 ZHX1Q9UKY1 873 aaPredicted RBP5.46□□□□□ -1.54
SRP54-211ENST00000556445 RABL2BQ9UNT1 228 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 CLCA2Q9UQC9 943 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 STXBP5LQ9Y2K9 1186 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 CHST2Q9Y4C5 530 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 PCDHA1Q9Y5I3 950 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 ADAMTSL1Q8N6G6 1762 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms