RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PROSCO94903 275 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 RHOCP08134 193 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 SP9P0CG40 484 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 ARL4AP40617 200 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 SGSHP51688 502 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 NAP1L1P55209 391 aaKnown RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 YBEYP58557 167 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 TPI1P60174 286 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 GAS6Q14393 721 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 FNDC3BQ53EP0 1204 aaKnown RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 USP39Q53GS9 565 aaKnown RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 PITRM1Q5JRX3 1037 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 RETSATQ6NUM9 610 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 SERPINA13PQ6UXR4 307 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 C11orf74Q86VG3 221 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 LONP2Q86WA8 852 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 LURAP1LQ8IV03 231 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 ZNF683Q8IZ20 524 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 CCDC33Q8N5R6 958 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 LZTR1Q8N653 840 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 CCDC185Q8N715 623 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 EZH1Q92800 747 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-206ENST00000555046 GABRG3Q99928 467 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 FEM1AQ9BSK4 669 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 MAGEH1Q9H213 219 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 ANLNQ9NQW6 1124 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 TMEM248Q9NWD8 314 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 SLC25A13Q9UJS0 675 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 VPS28Q9UK41 221 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 ANGPTL2Q9UKU9 493 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 AP4E1Q9UPM8 1137 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 STON1Q9Y6Q2 735 aa10.88□□□□□ -0.67
TMEM260-206ENST00000555046 TARSL2A2RTX5 802 aaKnown RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 BTNL10A8MVZ5 291 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 WASH4PA8MWX3 477 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 H3BRJ5 948 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 EEF2KO00418 725 aaKnown RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 PROS1P07225 676 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 HOXB2P14652 356 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 CD70P32970 193 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 CSKP41240 450 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 HADHBP55084 474 aaKnown RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 SATB1Q01826 763 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 MESP2Q0VG99 397 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ENPP2Q13822 863 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ZNF234Q14588 700 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 MESDQ14696 234 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 PDK2Q15119 407 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ALFQ53S48 1182 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 FSCBQ5H9T9 825 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ZFYVE27Q5T4F4 411 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 MANEALQ5VSG8 457 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 LRRC38Q5VT99 294 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 KIAA1328Q86T90 577 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ARFGAP1Q8N6T3 406 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 SUMF1Q8NBK3 374 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 KCTD6Q8NC69 237 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 PACSIN1Q9BY11 444 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 DHX35Q9H5Z1 703 aaKnown RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 MPP6Q9NZW5 540 aa10.87□□□□□ -0.67
TMEM260-206ENST00000555046 BCCIPQ9P287 314 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 RCOR3Q9P2K3 495 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-206ENST00000555046 AKAP13Q12802 2813 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 TENM4Q6N022 2769 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 ZSCAN5CA6NGD5 496 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-206ENST00000555046 SOWAHDA6NJG2 315 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 I6L893 689 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-206ENST00000555046 SGK1O00141 431 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 AXIN1O15169 862 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 ARHGAP6O43182 974 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 RAMP2O60895 175 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 ZNF217O75362 1048 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 CNTN5O94779 1100 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 EPHX1P07099 455 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 HOXC13P31276 330 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 NDST2P52849 883 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 GNA12Q03113 381 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 LMNB2Q03252 620 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 ZNF252P-AS1Q0IIN9 211 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 KRT81Q14533 505 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 POLD3Q15054 466 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-206ENST00000555046 DPYSL2Q16555 572 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 PARP15Q460N3 678 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 RAB6CQ53S08 254 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 EGFLAMQ63HQ2 1017 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 TMEM215Q68D42 235 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 IL31Q6EBC2 164 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 CXorf57Q6NSI4 855 aaKnown RBP10.86□□□□□ -0.67
TMEM260-206ENST00000555046 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
TMEM260-206ENST00000555046 TFAP2DQ7Z6R9 452 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms