RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SLC39A13Q96H72 371 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 LMLNQ96KR4 655 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 FCRL2Q96LA5 508 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 FAM81BQ96LP2 452 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 CITED4Q96RK1 184 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 SLC2A11Q9BYW1 496 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 MIS12Q9H081 205 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 VPS45Q9NRW7 570 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 CACNA2D2Q9NY47 1150 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 THAP10Q9P2Z0 257 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RAD54BQ9Y620 910 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 ITPR1Q14643 2758 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 CEP192Q8TEP8 1941 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 LNP1A1A4G5 178 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PATE3B3GLJ2 98 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 E5RJQ4 531 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 NPC1O15118 1278 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 LETM1O95202 739 aaPredicted RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 CAVIN2O95810 425 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 CYBBP04839 570 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 HLA-FP30511 346 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 GBP1P32455 592 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 IL12RB1P42701 662 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PTGER3P43115 390 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ACADSBP45954 432 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ZNF445P59923 1031 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 DAB2P98082 770 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 CREB5Q02930 508 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PDCLQ13371 301 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TAF5Q15542 800 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 MAN2A1Q16706 1144 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 C4orf46Q504U0 113 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 MPPE1Q53F39 396 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 SPDYCQ5MJ68 293 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 SYPL2Q5VXT5 272 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TAC4Q86UU9 113 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ADIPOR2Q86V24 386 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TMEFF1Q8IYR6 380 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 WFDC5Q8TCV5 224 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 GPT2Q8TD30 523 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 DDI1Q8WTU0 396 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 SORCS1Q8WY21 1168 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 MRGPRX1Q96LB2 322 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PRICKLE1Q96MT3 831 aaPredicted RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 NAP1L5Q96NT1 182 aaPredicted RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 NAA15Q9BXJ9 866 aaKnown RBP6.9□□□□□ -1.3
TMEM116-208ENST00000549537 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 CD93Q9NPY3 652 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TMEM74BQ9NUR3 256 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 ELOVL2Q9NXB9 296 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TJP2Q9UDY2 1190 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 NAALADL1Q9UQQ1 740 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 STON1Q9Y6Q2 735 aa6.9□□□□□ -1.3
TMEM116-208ENST00000549537 PCDH15Q96QU1 1955 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 IGHV1OR15-9A0A0B4J2B8 117 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 GOLGA6L7A0A1B0GV03 622 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TGFBR3LH3BV60 316 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 FOXN3O00409 490 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 IRAK2O43187 625 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 THAP12O43422 761 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 MED7O43513 233 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 FZD6O60353 706 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ACSL4O60488 711 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TSPAN3O60637 253 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 IGLV3-19P01714 112 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ALBP02768 609 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 PNMA6AP0CW24 399 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 NCAM1P13591 858 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 NID1P14543 1247 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 PRKCHP24723 683 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ADH7P40394 386 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 DHPSP49366 369 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 COPAP53621 1224 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 RAC1P63000 192 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 RACK1P63244 317 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 PITX1P78337 314 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 BYSLQ13895 437 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ZNF234Q14588 700 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 FUT11Q495W5 492 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 AASDHQ4L235 1098 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 HSP90AA4PQ58FG1 418 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 CT47A1Q5JQC4 288 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 MPP7Q5T2T1 576 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 STPG1Q5TH74 334 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 NUGGCQ68CJ6 796 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 RFWD3Q6PCD5 774 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms