RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CLDN6P56747 220 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 CDK17Q00537 523 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 CENPCQ03188 943 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 VAC14Q08AM6 782 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 IFRD2Q12894 506 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 NAA35Q5VZE5 725 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 GRAMD4Q6IC98 578 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 ZNF574Q6ZN55 896 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 PHF13Q86YI8 300 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 WBP2Q969T9 261 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 ZFRQ96KR1 1074 aaKnown RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 NUCKS1Q9H1E3 243 aaKnown RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 CNGB3Q9NQW8 809 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 SMPD4Q9NXE4 827 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 H0Y8X5 98 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 GREM1O60565 184 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 TBX18O95935 607 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 CTSKP43235 329 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ILKQ13418 452 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 EIF4EBP2Q13542 120 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 GSE1Q14687 1217 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 STARD3Q14849 445 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 FUT11Q495W5 492 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 SYPL2Q5VXT5 272 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 OLFML1Q6UWY5 402 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 XYLT1Q86Y38 959 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ZNF397Q8NF99 534 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 TSC1Q92574 1164 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ZNF578Q96N58 590 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 MIS12Q9H081 205 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 CCSER2Q9H7U1 834 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 TMEM59LQ9UK28 342 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 NUDT5Q9UKK9 219 aa11.32□□□□□ -0.6
NEDD8-204ENST00000526430 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
NEDD8-204ENST00000526430 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 PRRT4C9JH25 899 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 NPC1O15118 1278 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 TRIM24O15164 1050 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 COCHO43405 550 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 LDOC1O95751 146 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 GZMAP12544 262 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 ACADSBP45954 432 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 GSCP56915 257 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 PITX1P78337 314 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 ENPP2Q13822 863 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 ANO4Q32M45 955 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 MMS22LQ6ZRQ5 1243 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 DCBLD1Q8N8Z6 715 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 CNDP2Q96KP4 475 aaKnown RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 DPH1Q9BZG8 443 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 TRIM4Q9C037 500 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 FAM117AQ9C073 453 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 DNAJC17Q9NVM6 304 aaKnown RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-204ENST00000526430 SLCO1B1Q9Y6L6 691 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
NEDD8-204ENST00000526430 RELNP78509 3460 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 ITPR2Q14571 2701 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 MDM4O15151 490 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 GJB6O95452 261 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 GLDCP23378 1020 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 SLC8A3P57103 927 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms