RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 WFIKKN2Q8TEU8 576 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 EXOC4Q96A65 974 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 TSGA13Q96PP4 275 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 PSMB7Q99436 277 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 FEM1AQ9BSK4 669 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 HOMER3Q9NSC5 361 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 DTLQ9NZJ0 730 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 DEC1Q9P2X7 70 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 CDC23Q9UJX2 597 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 F5P12259 2224 aa12.27□□□□□ -0.44
PDLIM5-220ENST00000514830 ARHGAP42A6NI28 874 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 HACD1B0YJ81 288 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 MFSD11O43934 449 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 RHOCP08134 193 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 HLA-FP30511 346 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 CTHP32929 405 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 DGKGP49619 791 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 GBE1Q04446 702 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 LMAN2Q12907 356 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC10A2Q12908 348 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 SERINC3Q13530 473 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 POLD3Q15054 466 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 EIF4HQ15056 248 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 PDK1Q15118 436 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 NOMO1Q15155 1222 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 E2F5Q15329 346 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 CYP1B1Q16678 543 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 FSCBQ5H9T9 825 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF572Q7Z3I7 529 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 RNF135Q8IUD6 432 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 AHI1Q8N157 1196 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 DCAF4L2Q8NA75 395 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 OR52K2Q8NGK3 314 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 P3H4Q92791 437 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 TTC17Q96AE7 1141 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 ACDQ96AP0 544 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 HDAC11Q96DB2 347 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 PRRX2Q99811 253 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 HEMGNQ9BXL5 484 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 PLK2Q9NYY3 685 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 GGA2Q9UJY4 613 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 CLEC4EQ9ULY5 219 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 MFHAS1Q9Y4C4 1052 aa12.27□□□□□ -0.45
PDLIM5-220ENST00000514830 TCRBV7S2A1N4TA0A589 114 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ZSCAN5CA6NGD5 496 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 RASA4BC9J798 803 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF185O15231 689 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 RASA4O43374 803 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 TIMM44O43615 452 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 NARSO43776 548 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ZMPSTE24O75844 475 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PABPC1P11940 636 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 CCNCP24863 283 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 CD70P32970 193 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 GARSP41250 739 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 GRIA2P42262 883 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PRKCQQ04759 706 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 SULT2A1Q06520 285 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PPIDQ08752 370 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 CCNG2Q16589 344 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 LONRF2Q1L5Z9 754 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PLEKHG6Q3KR16 790 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 RNF219Q5W0B1 726 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 KAZNQ674X7 775 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 GRAMD4Q6IC98 578 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 NUDT18Q6ZVK8 323 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 C12orf40Q86WS4 652 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 KDM1BQ8NB78 822 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ACTL9Q8TC94 416 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 BHMTQ93088 406 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 NKD2Q969F2 451 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF599Q96NL3 588 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PNKPQ96T60 521 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC39A8Q9C0K1 460 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 DNAJC17Q9NVM6 304 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 MRFAP1Q9Y605 127 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 PIAS3Q9Y6X2 628 aa12.26□□□□□ -0.45
PDLIM5-220ENST00000514830 A0A0D9SEW6 157 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 SHISA7A6NL88 538 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 MAN2B1O00754 1011 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PPP1R12AO14974 1030 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 NPC1O15118 1278 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 KDELR3O43731 214 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 MAFKO60675 156 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 ASLP04424 464 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms