RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 VPS52Q8N1B4 723 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 KDM1BQ8NB78 822 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 EID2BQ96D98 161 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 SF3B5Q9BWJ5 86 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 PABPC3Q9H361 631 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 ELAC1Q9H777 363 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 PLAC1Q9HBJ0 212 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 PDE11AQ9HCR9 933 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 Q9N2J8 555 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 PRDM8Q9NQV8 689 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 PROCRQ9UNN8 238 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 LRCH1Q9Y2L9 728 aa5.07□□□□□ -1.6
UBE2D3-225ENST00000508476 INAFM1C9JVW0 142 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 ACKR2O00590 384 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 SKAP2O75563 359 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 LCKP06239 509 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 ITGA2BP08514 1039 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 CPA1P15085 419 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 SERPINF1P36955 418 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 SELENOVP59797 346 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 CDK18Q07002 472 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 GPR18Q14330 331 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 LRRC24Q50LG9 513 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 TTC22Q5TAA0 569 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 SULT6B1Q6IMI4 303 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 PGBD2Q6P3X8 592 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 MTFR2Q6P444 385 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 AAGABQ6PD74 315 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 RRAGAQ7L523 313 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 CCDC146Q8IYE0 955 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 LRRC57Q8N9N7 239 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 KCNJ9Q92806 393 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 CTAGE1Q96RT6 745 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 NPAS1Q99742 590 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 NTPCRQ9BSD7 190 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 ABHD16BQ9H3Z7 469 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 KRCC1Q9NPI7 259 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 TMEM248Q9NWD8 314 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 WWOXQ9NZC7 414 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 LRFN1Q9P244 771 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 HERC5Q9UII4 1024 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 PTGDR2Q9Y5Y4 395 aa5.06□□□□□ -1.6
UBE2D3-225ENST00000508476 ABHD14A-ACY1A0A1B0GW23 586 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 NPIPB13A6NJU9 1138 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 NPIPB5A8MRT5 1133 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 EFCAB8A8MWE9 144 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 NPIPB4C9JG80 1138 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 RGS14O43566 566 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 LCATP04180 440 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 CYP1A2P05177 515 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 TYK2P29597 1187 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 MLH1P40692 756 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 RASSF2P50749 326 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 PMS2P54278 862 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 AP2B1P63010 937 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 RPS6KA2Q15349 733 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 GPR162Q16538 588 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 INO80DQ53TQ3 878 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 SYNE3Q6ZMZ3 975 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 RAB11FIP2Q7L804 512 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 ENDOVQ8N8Q3 282 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 GABPB2Q8TAK5 448 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 SLC2A12Q8TD20 617 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 B3GNT4Q9C0J1 378 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 SLCO5A1Q9H2Y9 848 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 HIPK3Q9H422 1215 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 NCKIPSDQ9NZQ3 722 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 PLEKHB1Q9UF11 243 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 SLC25A13Q9UJS0 675 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 MYO6Q9UM54 1294 aa5.05□□□□□ -1.6
UBE2D3-225ENST00000508476 GAGE12JA6NER3 117 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 PLIN1O60240 522 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 ACAA1P09110 424 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 PKMP14618 531 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 HOXB9P17482 250 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 CHRNB2P17787 502 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 HTR3AP46098 478 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 CYP2J2P51589 502 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 GPS2Q13227 327 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 PKP1Q13835 747 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 TBRG1Q3YBR2 411 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 TMEM71Q6P5X7 295 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 RASGRP2Q7LDG7 609 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 CADM3Q8N126 398 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 IQCF1Q8N6M8 205 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 STT3BQ8TCJ2 826 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 C2CD4CQ8TF44 421 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 ARRDC3Q96B67 414 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 C3orf49Q96BT1 292 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 RMDN3Q96TC7 470 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 ACTR5Q9H9F9 607 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 SLC22A11Q9NSA0 550 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 RNF146Q9NTX7 359 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 C19orf53Q9UNZ5 99 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-225ENST00000508476 PRR23D1E9PI22 279 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-225ENST00000508476 PRR23D2P0DMB1 279 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms