RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CD27P26842 260 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 GALCP54803 685 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 FMO1Q01740 532 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ELAVL3Q14576 367 aaKnown RBP23.65■■□□□ 1.38
COL9A3-213ENST00000489045 SYCP1Q15431 976 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ALFQ53S48 1182 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 KIAA0895LQ68EN5 471 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ZNF683Q8IZ20 524 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 AADATQ8N5Z0 425 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ANKRD20A12PQ8NF67 263 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 CFAP57Q96MR6 1250 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 CAMK1GQ96NX5 476 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 GAREM1Q9H706 876 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 METTL5Q9NRN9 209 aaKnown RBP23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ADAMTS1Q9UHI8 967 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 FZD4Q9ULV1 537 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 WASF3Q9UPY6 502 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 TBC1D30Q9Y2I9 924 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 DAAM1Q9Y4D1 1078 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 LGALS16A8MUM7 142 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 SH3BP5O60239 455 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 IL1BP01584 269 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 CYP1A1P04798 512 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-213ENST00000489045 ZNF18P17022 549 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 VASPP50552 380 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-213ENST00000489045 FAM193AP78312 1265 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 CCDC183Q5T5S1 534 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 NCEH1Q6PIU2 408 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 IL27RAQ6UWB1 636 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 LRSAM1Q6UWE0 723 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 BNIPLQ7Z465 357 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 NAXDQ8IW45 347 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 PCMTD1Q96MG8 357 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-213ENST00000489045 ORAI3Q9BRQ5 295 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 MUC3BQ9H195 1237 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 OSGEPQ9NPF4 335 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 TMEM51Q9NW97 253 aa23.64■■□□□ 1.37
COL9A3-213ENST00000489045 LRRC72A6NJI9 287 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 ATP9BO43861 1147 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 MBD3O95983 291 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 RHOCP08134 193 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 SPINK2P20155 84 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 C5AR1P21730 350 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 RDXP35241 583 aaKnown RBP23.63■■□□□ 1.37
COL9A3-213ENST00000489045 STAT1P42224 750 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 TEAD4Q15561 434 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 HLA-BQ31612 363 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 ACCSLQ4AC99 568 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 LAYNQ6UX15 382 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 LRRC31Q6UY01 552 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 EMC1Q8N766 993 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 C1orf74Q96LT6 269 aa23.63■■□□□ 1.37
COL9A3-213ENST00000489045 FNDC3AQ9Y2H6 1198 aaKnown RBP23.63■■□□□ 1.37
COL9A3-213ENST00000489045 FRYQ5TBA9 3013 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 DRGXA6NNA5 263 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 MMP8P22894 467 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 GRIA4P48058 902 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 HNRNPDQ14103 355 aaKnown RBP23.62■■□□□ 1.37
COL9A3-213ENST00000489045 KIF19Q2TAC6 998 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 ARCQ7LC44 396 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 PHLDB2Q86SQ0 1253 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 FAM131BQ86XD5 332 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 SH2D3CQ8N5H7 860 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 NEK11Q8NG66 645 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 OR2T34Q8NGX1 318 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 SLC30A5Q8TAD4 765 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 OR8D1Q8WZ84 308 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 C11orf70Q9BRQ4 267 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 MPP6Q9NZW5 540 aa23.62■■□□□ 1.37
COL9A3-213ENST00000489045 AKAP13Q12802 2813 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 E9PAM4 449 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 ZNF883P0CG24 379 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 GOT1P17174 413 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 CDK11BP21127 795 aaKnown RBP23.61■■□□□ 1.37
COL9A3-213ENST00000489045 DRD3P35462 400 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 ATP11AP98196 1134 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 UBXN1Q04323 297 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 NCAPHQ15003 741 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 DLG2Q15700 870 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 ACBD5Q5T8D3 534 aaPredicted RBP23.61■■□□□ 1.37
COL9A3-213ENST00000489045 TRIM72Q6ZMU5 477 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 Q6ZVU0 165 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 TFAP2DQ7Z6R9 452 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 SETD3Q86TU7 594 aaPredicted RBP23.61■■□□□ 1.37
COL9A3-213ENST00000489045 PSMB7Q99436 277 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 SCNM1Q9BWG6 230 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 HSD3B7Q9H2F3 369 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 TM7SF3Q9NS93 570 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 ANKRD6Q9Y2G4 727 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 SNX11Q9Y5W9 270 aa23.61■■□□□ 1.37
COL9A3-213ENST00000489045 IGLV3-10A0A075B6K4 115 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 A0A1W2PPC4 97 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 SNAP91O60641 907 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 METAP1P53582 386 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 ADPRHP54922 357 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 KRT83P78385 493 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 ST3GAL2Q16842 350 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 ARTNQ5T4W7 220 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 ADAT2Q7Z6V5 191 aaKnown RBP23.6■■□□□ 1.37
COL9A3-213ENST00000489045 DSG4Q86SJ6 1040 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms