RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RNGTTO60942 597 aaKnown RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 SMC2O95347 1197 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 TRUB2O95900 331 aaKnown RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 IL1BP01584 269 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 TBC1D3HP0C7X1 549 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 SLC2A3P11169 496 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ITPKBP27987 946 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 PPP1R2P41236 205 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 PPP2CBP62714 309 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 YWHAZP63104 245 aaKnown RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 PPP2CAP67775 309 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 E2F1Q01094 437 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 C19orf57Q0VDD7 668 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 MTA1Q13330 715 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 PROX2Q3B8N5 592 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 FAM46CQ5VWP2 391 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 TBC1D3GQ6DHY5 549 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 SMYD5Q6GMV2 418 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 TBC1D3CQ6IPX1 549 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 DSG4Q86SJ6 1040 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ELOA2Q8IYF1 753 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 TBC1D3Q8IZP1 549 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 BAP1Q92560 729 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 FGF11Q92914 225 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 FAM149B1Q96BN6 582 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 ALG14Q96F25 216 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 MED15Q96RN5 788 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 PPM1HQ9ULR3 514 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 CEP83Q9Y592 693 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 AK5Q9Y6K8 562 aa13.42□□□□□ -0.26
HDAC6-227ENST00000485102 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 F5H5T6 163 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 PRAMEF26H0Y7S4 382 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 CAPN9O14815 690 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 PSMA7O14818 248 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 MCF2LO15068 1137 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 MOCS2O96007 188 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 GLI1P08151 1106 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 STK19P49842 368 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 SEMG2Q02383 582 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 CXorf57Q6NSI4 855 aaKnown RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 CHSY1Q86X52 802 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-227ENST00000485102 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 ST7Q9NRC1 585 aa13.41□□□□□ -0.26
HDAC6-227ENST00000485102 MGAQ8IWI9 3026 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
HDAC6-227ENST00000485102 STIM1Q13586 685 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 STAT4Q14765 748 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 C5orf22Q49AR2 442 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 SETMARQ53H47 684 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-227ENST00000485102 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 TTI2Q6NXR4 508 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 RRAGAQ7L523 313 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 TMEM145Q8NBT3 493 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 OR8D1Q8WZ84 308 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 FEM1AQ9BSK4 669 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 PREBQ9HCU5 417 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 CLCA2Q9UQC9 943 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 OR51B4Q9Y5P0 310 aa13.4□□□□□ -0.26
HDAC6-227ENST00000485102 ASH1LQ9NR48 2969 aaKnown RBP13.39□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF462Q96JM2 2506 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 TEX51A0A1B0GUA7 166 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 MED7O43513 233 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 RTN2O75298 545 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 C1QL1O75973 258 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 CALCAP01258 141 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 VAV1P15498 845 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 PDGFRAP16234 1089 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 GLDCP23378 1020 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 CCR1P32246 355 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 ACTN2P35609 894 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 CLDN6P56747 220 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 UBE2HP62256 183 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 INSM1Q01101 510 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-227ENST00000485102 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 CNTN1Q12860 1018 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 FBXL22Q6P050 247 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms