RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CYS1Q717R9 158 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 FAM131BQ86XD5 332 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 NT5DC4Q86YG4 428 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 ZDHHC17Q8IUH5 632 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 FAM124BQ9H5Z6 455 aaPredicted RBP16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 A0A0A0MRY4 1105 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 E2F8A0AVK6 867 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 H3BSA7 217 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF195O14628 629 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 HNRNPCP07910 306 aaKnown RBP eCLIP16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 FAM58BPP0C7Q3 252 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 GRK2P25098 689 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 SLC5A2P31639 672 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 SERPINB8P50452 374 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 NIPAL4Q0D2K0 466 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 PCLAFQ15004 111 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 FSCBQ5H9T9 825 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 MFSD4BQ5TF39 518 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 CES3Q6UWW8 571 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 SLC26A9Q7LBE3 791 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 ALDH16A1Q8IZ83 802 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 CDKL2Q92772 493 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 MAML3Q96JK9 1138 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 SPATA13Q96N96 652 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 RTKNQ9BST9 563 aa16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 GNEQ9Y223 722 aaKnown RBP16.96■□□□□ 0.3
PCDHA1-201ENST00000378133 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 TPD52L2O43399 206 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 GLRA3O75311 464 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 DGKIO75912 1065 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 GRM5P41594 1212 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 EMP3P54852 163 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 MPP3Q13368 585 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 C6orf52Q5T4I8 152 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 STEAP4Q687X5 459 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF410Q86VK4 478 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 MAN1C1Q9NR34 630 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 TMPRSS4Q9NRS4 437 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 THEGQ9P2T0 379 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 STK39Q9UEW8 545 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 TRPA1O75762 1119 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 LMO2P25791 158 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 PRDX6P30041 224 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 ARRB2P32121 409 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 NR1H2P55055 460 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 MRPS22P82650 360 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 PPIDQ08752 370 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 KLF10Q13118 480 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 LRRC8BQ6P9F7 803 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 CATSPER1Q8NEC5 780 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 PGLYRP2Q96PD5 576 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
PCDHA1-201ENST00000378133 E9PBE3 544 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 AIM2O14862 343 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ZBTB14O43829 449 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 KLHL41O60662 606 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 TOMM70O94826 608 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ARL4AP40617 200 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ABCE1P61221 599 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 SULT2A1Q06520 285 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 KIZQ2M2Z5 673 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 GALNT4Q8N4A0 578 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ACMSDQ8TDX5 336 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 SERPINI1Q99574 410 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 COPS7BQ9H9Q2 264 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 DCDC2Q9UHG0 476 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 SYNJ2BP-COX16A0A087WUM0 186 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 MFSD11O43934 449 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ERVK-10P10266 1014 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 RALBP11234 206 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 MLH1P40692 756 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ADGRE1Q14246 886 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ANKRD52Q8NB46 1076 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 CCNYQ8ND76 341 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 SNRNP27Q8WVK2 155 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 P2RY11Q96G91 374 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 LENG8Q96PV6 779 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF358Q9NW07 568 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 TMEM216Q9P0N5 145 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 COX16Q9P0S2 106 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 GTF2IRD1Q9UHL9 959 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 AK5Q9Y6K8 562 aa16.94■□□□□ 0.3
PCDHA1-201ENST00000378133 RNF103O00237 685 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PRKCGP05129 697 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 MLNP12872 115 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 CLCN2P51788 898 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms