RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SLC16A12Q6ZSM3 486 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NLRC3Q7RTR2 1065 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 PEX26Q7Z412 305 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 GPR141Q7Z602 305 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FAM160B2Q86V87 743 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 LRRTM4Q86VH4 590 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CEP97Q8IW35 865 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC105Q8IYK2 499 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 THNSL1Q8IYQ7 743 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 REXO1Q8N1G1 1221 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 KLHL36Q8N4N3 616 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ENDOVQ8N8Q3 282 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 OR9A1PQ8NGU1 263 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ACTRT2Q8TDY3 377 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 POMGNT1Q8WZA1 660 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SMG7Q92540 1137 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 KRT35Q92764 455 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 TANKQ92844 425 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM41AQ96HV5 264 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AK8Q96MA6 479 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CLUHP3Q96NS8 147 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 BBS4Q96RK4 519 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MDFIQ99750 246 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FAM83CQ9BQN1 747 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DSCC1Q9BVC3 393 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 BCL2L14Q9BZR8 327 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 C6orf62Q9GZU0 229 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 EPC1Q9H2F5 836 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 IGFLR1Q9H665 355 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ZMAT3Q9HA38 289 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SPACA1Q9HBV2 294 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 S100A14Q9HCY8 104 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NRBP2Q9NSY0 501 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NUDT15Q9NV35 164 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DDX43Q9NXZ2 648 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 TLK1Q9UKI8 766 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ENTPD4Q9Y227 616 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DLGAP4Q9Y2H0 992 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 EPRSP07814 1512 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ROBO2Q9HCK4 1378 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SMIM31A0A1B0GVY4 71 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ESYT2A0FGR8 921 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF98A6NK75 572 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ADARB2-AS1A8MUL3 147 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MINDY4BA8MYZ0 360 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 VNN1O95497 513 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CRTAMO95727 393 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 KRT7P08729 469 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DLDP09622 509 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 GAAP10253 952 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 PSMA2P25787 234 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CLCN5P51795 746 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NKX2-5P52952 324 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NR1H2P55055 460 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 VAMP2P63027 116 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 RPP30P78346 268 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF252P-AS1Q0IIN9 211 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ACVR2BQ13705 512 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 EFTUD2Q15029 972 aaKnown RBP eCLIP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FAM76BQ5HYJ3 339 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 C1orf185Q5T7R7 199 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SLX4IPQ5VYV7 408 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HAUS3Q68CZ6 603 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 PKN3Q6P5Z2 889 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 APOA5Q6Q788 366 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 KRT25Q7Z3Z0 450 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FJX1Q86VR8 437 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 RIOX2Q8IUF8 465 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MCEMP1Q8IX19 187 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DIS3L2Q8IYB7 885 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ANKFN1Q8N957 763 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 GLIS1Q8NBF1 620 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 PDZD8Q8NEN9 1154 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HUS1BQ8NHY5 278 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NUDT8Q8WV74 236 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SYN2Q92777 582 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 VPS33AQ96AX1 596 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FEM1CQ96JP0 617 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 USP28Q96RU2 1077 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SLC29A1Q99808 456 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SELENOSQ9BQE4 189 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CENPKQ9BS16 269 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 BDH2Q9BUT1 245 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FRMD8P1Q9BZ68 369 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HOXD1Q9GZZ0 328 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NUP62CLQ9H1M0 184 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SLC6A17Q9H1V8 727 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC86Q9H6F5 360 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 COPS7BQ9H9Q2 264 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MID1IP1Q9NPA3 183 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 VPS45Q9NRW7 570 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ZSWIM5Q9P217 1185 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CTTNBP2NLQ9P2B4 639 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SUCOQ9UBS9 1254 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 BAIAP2L1Q9UHR4 511 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NUP50Q9UKX7 468 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CNOT11Q9UKZ1 510 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AGO1Q9UL18 857 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SMG5Q9UPR3 1016 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms