RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CSPG5O95196 566 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 LATS1O95835 1130 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 OLFM2O95897 454 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 POU2F2P09086 479 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 MYL4P12829 197 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 PTPN2P17706 415 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 HDCP19113 662 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TACR2P21452 398 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 DDX6P26196 483 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDH13-214ENST00000569455 GABRR2P28476 465 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 IRS1P35568 1242 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 FDFT1P37268 417 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 GGCXP38435 758 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 GARSP41250 739 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 NDST2P52849 883 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 PMS2P54278 862 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 BASP1P80723 227 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 ADAM15Q13444 863 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 KCNC3Q14003 757 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ARHGAP15Q53QZ3 475 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 HSP90B2PQ58FF3 399 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TCEAL5Q5H9L2 206 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 RABGAP1LQ5R372 815 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 RNASEH2BQ5TBB1 312 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 RAP1GAP2Q684P5 730 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ITPRIPL1Q6GPH6 555 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TIGD7Q6NT04 549 aaPredicted RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 FBXL22Q6P050 247 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 CENPUQ71F23 418 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TRMT10CQ7L0Y3 403 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 C14orf80Q86SX3 495 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TMEM150AQ86TG1 271 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 PRUNE1Q86TP1 453 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 CCDC25Q86WR0 208 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 CCDC13Q8IYE1 715 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ZCCHC9Q8N567 271 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 ATPAF2Q8N5M1 289 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 NPWQ8N729 165 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 GOLGA6L1Q8N7Z2 621 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 UBLCP1Q8WVY7 318 aaPredicted RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 SPATA13Q96N96 652 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 RPRD1AQ96P16 312 aaPredicted RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 LGMNQ99538 433 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 KLF16Q9BXK1 252 aaPredicted RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ADAM7Q9H2U9 754 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ATXN3LQ9H3M9 355 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 IL21Q9HBE4 155 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 ZNF334Q9HCZ1 680 aaPredicted RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 MAN1C1Q9NR34 630 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 TMEM248Q9NWD8 314 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 XPO7Q9UIA9 1087 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 ZMYM5Q9UJ78 669 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 LSM7Q9UK45 103 aaKnown RBP7.84□□□□□ -1.15
CDH13-214ENST00000569455 ATP8A1Q9Y2Q0 1164 aa7.84□□□□□ -1.15
CDH13-214ENST00000569455 WDFY4Q6ZS81 3184 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TYW5A2RUC4 315 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 C2orf78A6NCI8 922 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ARHGAP42A6NI28 874 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 DRGXA6NNA5 263 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 RNF103O00237 685 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 DFFAO00273 331 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 EIF3HO15372 352 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDH13-214ENST00000569455 CCL16O15467 120 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 STC2O76061 302 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CKMP06732 381 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 VAV1P15498 845 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CCNCP24863 283 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CORO1AP31146 461 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 HSD17B3P37058 310 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 NRIP1P48552 1158 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 LMAN1P49257 510 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 EIF3BP55884 814 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 ARL4CP56559 192 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 SARNPP82979 210 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 HYAL1Q12794 435 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 KCTD19Q17RG1 926 aaPredicted RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 ANO4Q32M45 955 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 C5orf22Q49AR2 442 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ANKRD20A2Q5SQ80 823 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ADGRF1Q5T601 910 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ANKRD20A1Q5TYW2 823 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TTC39BQ5VTQ0 682 aaPredicted RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 ANKRD20A3Q5VUR7 823 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 DENND2CQ68D51 928 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TXNDC8Q6A555 127 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 LRIG3Q6UXM1 1119 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 B4GALNT4Q76KP1 1039 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CROCCP2Q86T23 111 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TMC8Q8IU68 726 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 DENND1CQ8IV53 801 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ZNF683Q8IZ20 524 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 LGI2Q8N0V4 545 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 PDIK1LQ8N165 341 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 UMODL1-AS1Q8N2C9 162 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CCDC33Q8N5R6 958 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 NAT8LQ8N9F0 302 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TSEN2Q8NCE0 465 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms