RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 RTL3Q8N8U3 475 aaKnown RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 TERB1Q8NA31 727 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 TRIM58Q8NG06 486 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 OR7D4Q8NG98 312 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 ALG3Q92685 438 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 EZH1Q92800 747 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-208ENST00000558970 VPS28Q9UK41 221 aa12.77□□□□□ -0.37
GABPB1-208ENST00000558970 A0A0D9SEW6 157 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 CCDC66A2RUB6 948 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 DFFAO00273 331 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 MAN2B1O00754 1011 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 FGF10O15520 208 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-208ENST00000558970 KIF5CO60282 957 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 CISD3P0C7P0 127 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 IL4RP24394 825 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 CTNNA2P26232 953 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TIE1P35590 1138 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 ACVRL1P37023 503 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 RWDD2BP57060 319 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.37
GABPB1-208ENST00000558970 DPYSQ14117 519 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PDK2Q15119 407 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 MEI1Q5TIA1 1274 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 EMC10Q5UCC4 262 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 LRRC38Q5VT99 294 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 IL31Q6EBC2 164 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 LEKR1Q6ZMV7 388 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 MAP7D3Q8IWC1 876 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TP53INP2Q8IXH6 220 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 KATNAL2Q8IYT4 538 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 NPWQ8N729 165 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 FIBINQ8TAL6 211 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-208ENST00000558970 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 LRRN4Q8WUT4 740 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TSC1Q92574 1164 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 SHDQ96IW2 340 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 SPON2Q9BUD6 331 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 LTB4R2Q9NPC1 389 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 TMEM248Q9NWD8 314 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-208ENST00000558970 PCDHA3Q9Y5H8 950 aa12.76□□□□□ -0.37
GABPB1-208ENST00000558970 GOLGA6L9A6NEM1 432 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 TMEM221A6NGB7 291 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 C3orf70A6NLC5 250 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 FAM170BA6NMN3 283 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 M0R296 226 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 DDX3YO15523 660 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MFSD11O43934 449 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 RAMP2O60895 175 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 GLULP15104 373 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 GLDCP23378 1020 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 HOXC13P31276 330 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 EIF2DP41214 584 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 GRIA2P42262 883 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 WASP42768 502 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 CTSOP43234 321 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MAPKAPK2P49137 400 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 STARD6P59095 220 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 GNG11P61952 73 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 NHLH1Q02575 133 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 RPS6KA1Q15418 735 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 C2orf27AQ580R0 203 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 TMEM196Q5HYL7 178 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MBLAC2Q68D91 279 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 C1orf228Q6PIY5 440 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 Q6ZS52 159 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 AHI1Q8N157 1196 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 RBM41Q96IZ5 413 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 RPL10LQ96L21 214 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 ZNF670Q9BS34 389 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MAK16Q9BXY0 300 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 ZNF212Q9UDV6 495 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 FBXO10Q9UK96 956 aa12.75□□□□□ -0.37
GABPB1-208ENST00000558970 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MRPS17Q9Y2R5 130 aaKnown RBP12.75□□□□□ -0.37
GABPB1-208ENST00000558970 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
GABPB1-208ENST00000558970 RASA4BC9J798 803 aa12.74□□□□□ -0.37
GABPB1-208ENST00000558970 K7EQS6 105 aa12.74□□□□□ -0.37
GABPB1-208ENST00000558970 CBX4O00257 560 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms