RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CXCL8P10145 99 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 GABRB2P47870 512 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 PSMC1P62191 440 aaKnown RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 ADAM15Q13444 863 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 THOC5Q13769 683 aaKnown RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 STILQ15468 1287 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 UPP1Q16831 310 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 C2CD6Q53TS8 623 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 SCARA3Q6AZY7 606 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 LLGL2Q6P1M3 1020 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 DARS2Q6PI48 645 aaKnown RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 MYLK4Q86YV6 388 aaPredicted RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 C18orf25Q96B23 403 aaPredicted RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 XAB2Q9HCS7 855 aaKnown RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 BCAP29Q9UHQ4 241 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 KIAA1257Q9ULG3 409 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
HMGB2-205ENST00000511316 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 WDR91A4D1P6 747 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ENO4A6NNW6 628 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PDLIM1O00151 329 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PER2O15055 1255 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 LINC01565O15544 149 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 STK10O94804 968 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM63AO94886 807 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ENDOD1O94919 500 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CSPG5O95196 566 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CTSAP10619 480 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PYGBP11216 843 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ANPEPP15144 967 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ZFXP17010 805 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 BGNP21810 368 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 OR1G1P47890 313 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 SESN3P58005 492 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 OGDHQ02218 1023 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 OVGP1Q12889 678 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 HNRNPDQ14103 355 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 KYAT1Q16773 422 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 KBTBD12Q3ZCT8 623 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 BOLA3Q53S33 107 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ANKRD22Q5VYY1 191 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 RINLQ6ZS11 566 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 MRRFQ96E11 262 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TRIOO75962 3097 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TRIM49D1C9J1S8 452 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CFHP08603 1231 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CCDC130P13994 396 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 GRK2P25098 689 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PRDX6P30041 224 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ATICP31939 592 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CLCNKBP51801 687 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 MSS51Q4VC12 460 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CDKL3Q8IVW4 592 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 ZC3H7BQ9UGR2 993 aaKnown RBP13.18□□□□□ -0.3
HMGB2-205ENST00000511316 COMMD3-BMI1R4GMX3 469 aa13.18□□□□□ -0.3
HMGB2-205ENST00000511316 H3BRJ5 948 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 TRUB2O95900 331 aaKnown RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 APOEP02649 317 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 TPSB2P20231 275 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 RFC1P35251 1148 aaPredicted RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 ZNF143P52747 638 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms