RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	SEMA5A	Q13591	1074 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	CSHL1	Q14406	222 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	BEND5	Q7L4P6	421 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	IGFN1	Q86VF2	1251 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	ENGASE	Q8NFI3	743 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC22A17	Q8WUG5	538 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	PHKB	Q93100	1093 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	TIFA	Q96CG3	184 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	WDR77	Q9BQA1	342 aa	Predicted RBP	4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	SARG	Q9BW04	601 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	ARNT2	Q9HBZ2	717 aa		4.64	□□□□□ -1.67
SMC4-223	ENST00000493695	PNRC2	Q9NPJ4	139 aa	Known RBP	4.64	□□□□□ -1.67
SMC4-223	ENST00000493695		A0A0B4J293	547 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	LOC102724159	A0A0B4J2E5	919 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	PNMA6E	A0A0J9YXQ4	647 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	MS4A18	H0YCH9	400 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695		I6L893	689 aa	Predicted RBP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695		J3KTA2	159 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	VWA5A	O00534	786 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	CAND2	O75155	1236 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	CHRNB2	P17787	502 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	FGFR2	P21802	821 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC16A2	P36021	539 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	SELENOV	P59797	346 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	KRTAP10-5	P60370	271 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	ZP1	P60852	638 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	TRAF2	Q12933	501 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	PWP2	Q15269	919 aa	Known RBP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	ZNF672	Q499Z4	452 aa	Predicted RBP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	KIAA0408	Q6ZU52	694 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	RASGRP3	Q8IV61	690 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	ADGRF3	Q8IZF5	1079 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	DPP10	Q8N608	796 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	CMAS	Q8NFW8	434 aa	Predicted RBP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	APOLD1	Q96LR9	279 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	EPYC	Q99645	322 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	NUDT22	Q9BRQ3	303 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	ZNF304	Q9HCX3	659 aa		4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.63	□□□□□ -1.67
SMC4-223	ENST00000493695	CLCA1	A8K7I4	914 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	NTN3	O00634	580 aa	Predicted RBP	4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	KPNA5	O15131	536 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	PQBP1	O60828	265 aa	Known RBP	4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	NDST3	O95803	873 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	ALDOA	P04075	364 aa	Known RBP	4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	LCK	P06239	509 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	KRTAP5-9	P26371	169 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	KLRC2	P26717	231 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	PIK3CB	P42338	1070 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	TDRD12	Q587J7	1177 aa	Known RBP	4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	MSANTD2	Q6P1R3	559 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	ZNF367	Q7RTV3	350 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	PALB2	Q86YC2	1186 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	FAM185A	Q8N0U4	392 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	LRRC57	Q8N9N7	239 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	TTC17	Q96AE7	1141 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	B3GNT4	Q9C0J1	378 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	OCIAD1	Q9NX40	245 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	KCNG2	Q9UJ96	466 aa		4.62	□□□□□ -1.67
SMC4-223	ENST00000493695	STMND1	H3BQB6	276 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	KCNQ3	O43525	872 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	BUB3	O43684	328 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	PPP1R3D	O95685	299 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	ITGB8	P26012	769 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	KIF5A	Q12840	1032 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC5A9	Q2M3M2	681 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695		Q6ZSV7	163 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	NOL8	Q76FK4	1167 aa	Known RBP	4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	TXLNB	Q8N3L3	684 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	IGSF21	Q96ID5	467 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	CCDC136	Q96JN2	1154 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	DUX5	Q96PT3	197 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	EPS8L2	Q9H6S3	715 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	RAP2C	Q9Y3L5	183 aa		4.61	□□□□□ -1.67
SMC4-223	ENST00000493695	CCDC194	A0A1B0GVG4	234 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	ASAP2	O43150	1006 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	ITGA5	P08648	1049 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	TNFSF8	P32971	234 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	SEC61A1	P61619	476 aa	Known RBP	4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	KLB	Q86Z14	1044 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	PJA1	Q8NG27	643 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC39A13	Q96H72	371 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	ZNF700	Q9H0M5	742 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	RNF146	Q9NTX7	359 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	MAN2B2	Q9Y2E5	1009 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC4A4	Q9Y6R1	1079 aa		4.6	□□□□□ -1.67
SMC4-223	ENST00000493695	ANO9	A1A5B4	782 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695		M0QYT0	321 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	APOL1	O14791	398 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	SLC16A5	O15375	505 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	EGR1	P18146	543 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	STAT1	P42224	750 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	TAS2R50	P59544	299 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	RNASEL	Q05823	741 aa	Known RBP	4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	ACSM2A	Q08AH3	577 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	KIF19	Q2TAC6	998 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	MAP9	Q49MG5	647 aa		4.59	□□□□□ -1.67
SMC4-223	ENST00000493695	ERAP2	Q6P179	960 aa		4.59	□□□□□ -1.67

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