RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 RBM41Q96IZ5 413 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 SLC2A11Q9BYW1 496 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 NDFIP2Q9NV92 336 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 GGA2Q9UJY4 613 aa20.47■□□□□ 0.87
TRAPPC12-220ENST00000482645 KANSL1LA0AUZ9 987 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF185O15231 689 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 FGF10O15520 208 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 PDGFBP01127 241 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 EGFP01133 1207 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CISD3P0C7P0 127 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 HOXC13P31276 330 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 HTR7P34969 479 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CSKP41240 450 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 ARSEP51690 589 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF135P52742 658 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 STARD6P59095 220 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 LLGL1Q15334 1064 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 GEN1Q17RS7 908 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 PREPLQ4J6C6 727 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 C6orf118Q5T5N4 469 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 RNF43Q68DV7 783 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CXorf57Q6NSI4 855 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 ANKS1BQ7Z6G8 1248 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 NLRP14Q86W24 1093 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 RTL3Q8N8U3 475 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZNF557Q8N988 423 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 TERB1Q8NA31 727 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 OR52K2Q8NGK3 314 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 EXD1Q8NHP7 514 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CAPZA3Q96KX2 299 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 MUC3BQ9H195 1237 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CARD9Q9H257 536 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 TMEM248Q9NWD8 314 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 KIAA1522Q9P206 1035 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 FBXO10Q9UK96 956 aa20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 MRPS17Q9Y2R5 130 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-220ENST00000482645 CEP104O60308 925 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 PYGMP11217 842 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 PABPC1P11940 636 aaKnown RBP20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 ERCC2P18074 760 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 AMPD1P23109 780 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 TARSP26639 723 aaKnown RBP20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 GRIA2P42262 883 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 SEC13P55735 322 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 DPYSQ14117 519 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 TMEM196Q5HYL7 178 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 RNF219Q5W0B1 726 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 FSTL4Q6MZW2 842 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 PHTF2Q8N3S3 785 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 ZNF670Q9BS34 389 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 CIPCQ9C0C6 399 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 MTF2Q9Y483 593 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 TECTAO75443 2155 aa20.45■□□□□ 0.86
TRAPPC12-220ENST00000482645 TMEM221A6NGB7 291 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 FAM170BA6NMN3 283 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 M0R296 226 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 ZRANB2O95218 330 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 IL4RP24394 825 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 MZF1P28698 734 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 ANKRD20A8PQ5CZ79 823 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 NUDT18Q6ZVK8 323 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 TSC1Q92574 1164 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 PBKQ96KB5 322 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 LTB4R2Q9NPC1 389 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 RBM12Q9NTZ6 932 aaKnown RBP20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 RCOR3Q9P2K3 495 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 ZNF212Q9UDV6 495 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 SLC27A6Q9Y2P4 619 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 MFHAS1Q9Y4C4 1052 aa20.44■□□□□ 0.86
TRAPPC12-220ENST00000482645 A0A0D9SEW6 157 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 PRRT4C9JH25 899 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 PRLRP16471 622 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 DRD1P21728 446 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 HCAR3P49019 387 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 MAPKAPK2P49137 400 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 FUT11Q495W5 492 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 KAZNQ674X7 775 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 TMCO3Q6UWJ1 677 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 MFSD7Q6UXD7 560 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 SPOCD1Q6ZMY3 1216 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 SETD3Q86TU7 594 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 ZNF354CQ86Y25 554 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 SUGP1Q8IWZ8 645 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 APCDD1Q8J025 514 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 AHI1Q8N157 1196 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 NETO2Q8NC67 525 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 FAM71BQ8TC56 605 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 EZH1Q92800 747 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 CELF6Q96J87 481 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 MS4A14Q96JA4 679 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 MAK16Q9BXY0 300 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 EPHX3Q9H6B9 360 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 ETNK2Q9NVF9 386 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 SMARCAL1Q9NZC9 954 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 VPS28Q9UK41 221 aa20.43■□□□□ 0.86
TRAPPC12-220ENST00000482645 ATG2BQ96BY7 2078 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms