RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SIM2Q14190 667 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 PIGHQ14442 188 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 MESDQ14696 234 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SMTNL2Q2TAL5 461 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 ANO4Q32M45 955 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 FSCBQ5H9T9 825 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM196Q5HYL7 178 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 KCNT1Q5JUK3 1230 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM215Q68D42 235 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 FSTL4Q6MZW2 842 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SCYL2Q6P3W7 929 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TPRG1Q6ZUI0 275 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 ANKS1BQ7Z6G8 1248 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SLFN11Q7Z7L1 901 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 RALGPS2Q86X27 583 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CHSY1Q86X52 802 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CPA6Q8N4T0 437 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 ATP6V0D2Q8N8Y2 350 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CCDC112Q8NEF3 446 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TPCN2Q8NHX9 752 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CSGALNACT1Q8TDX6 532 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TSC1Q92574 1164 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 CD101Q93033 1021 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 RNF34Q969K3 372 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 TMA16Q96EY4 203 aaKnown RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SHDQ96IW2 340 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 KCTD15Q96SI1 283 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SNRNP25Q9BV90 132 aaKnown RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 BBS2Q9BXC9 721 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 OSBPL2Q9H1P3 480 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 NDFIP2Q9NV92 336 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 MPP6Q9NZW5 540 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 OR12D3Q9UGF7 316 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 IP6K2Q9UHH9 426 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 INTS6Q9UL03 887 aaKnown RBP7.21□□□□□ -1.26
LIMD1-204ENST00000474665 VANGL2Q9ULK5 521 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 PAXBP1Q9Y5B6 917 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 SPAG17Q6Q759 2223 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 LOC400499M0QZD8 3231 aa7.21□□□□□ -1.26
LIMD1-204ENST00000474665 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 NYNRINQ9P2P1 1898 aaKnown RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 GRID2IPA4D2P6 1211 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 C3orf70A6NLC5 250 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM110-MUSTN1A8MSY1 372 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 GOLGA6L6A8MZA4 724 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PRRT4C9JH25 899 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 E9PAM4 449 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 K7EQS6 105 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 BUB1O43683 1085 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 TBL1XO60907 577 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 EGFP01133 1207 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CD48P09326 243 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CHRNB1P11230 501 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 TDGF1P13385 188 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PLA2G2AP14555 144 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 COMTP21964 271 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 HOXC13P31276 330 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 L1CAMP32004 1257 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CD70P32970 193 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 MARCKSL1P49006 195 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PRKCQQ04759 706 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 GAD2Q05329 585 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 MTAPQ13126 283 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CCINQ13939 588 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 GAS6Q14393 721 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PON2Q15165 354 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 MPPE1Q53F39 396 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 MPP7Q5T2T1 576 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 ERMARDQ5T6L9 678 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 EMC10Q5UCC4 262 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CXorf57Q6NSI4 855 aaKnown RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 KIAA1211LQ6NV74 962 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PKN3Q6P5Z2 889 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 KIAA0907Q7Z7F0 614 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 NLRP14Q86W24 1093 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 REXO1L1PQ8IX06 675 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 RHOT2Q8IXI1 618 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 CCAR2Q8N163 923 aaKnown RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 C12orf50Q8NA57 414 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 HJURPQ8NCD3 748 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 FAM71BQ8TC56 605 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 DDI1Q8WTU0 396 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 ALG14Q96F25 216 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 P2RY13Q9BPV8 354 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 FAM126AQ9BYI3 521 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 IRX2Q9BZI1 471 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 KLC2Q9H0B6 622 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 C8orf33Q9H7E9 229 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 LTB4R2Q9NPC1 389 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PRMT8Q9NR22 394 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 RBM12Q9NTZ6 932 aaKnown RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 POLR3BQ9NW08 1133 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-204ENST00000474665 C2orf42Q9NWW7 574 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 STIM2Q9P246 746 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PYCARDQ9ULZ3 195 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 AP4E1Q9UPM8 1137 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 PPP2R2CQ9Y2T4 447 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms